ENSG00000109762


Homo sapiens

Features
Gene ID: ENSG00000109762
  
Biological name :SNX25
  
Synonyms : Q9H3E2 / SNX25 / sorting nexin 25
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: q35.1
Gene start: 185204237
Gene end: 185370185
  
Corresponding Affymetrix probe sets: 1555388_s_at (Human Genome U133 Plus 2.0 Array)   227311_at (Human Genome U133 Plus 2.0 Array)   227408_s_at (Human Genome U133 Plus 2.0 Array)   230066_at (Human Genome U133 Plus 2.0 Array)   232425_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000264694
Ensembl peptide - ENSP00000424826
Ensembl peptide - ENSP00000426255
Ensembl peptide - ENSP00000483653
NCBI entrez gene - 83891     See in Manteia.
RefSeq - XM_017008685
RefSeq - NM_001317781
RefSeq - XM_017008682
RefSeq - XM_017008683
RefSeq - XM_017008684
RefSeq - XM_005263267
RefSeq - XM_011532302
RefSeq - XM_011532303
RefSeq - XM_011532304
RefSeq - XM_011532305
RefSeq - XM_011532306
RefSeq - XM_011532307
RefSeq - XM_011532308
RefSeq - XM_017008680
RefSeq - XM_017008681
RefSeq Peptide - NP_001304710
swissprot - Q9H3E2
swissprot - H0Y9R5
Ensembl - ENSG00000109762
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snx25ENSDARG00000099545Danio rerio
 SNX25ENSGALG00000010610Gallus gallus
 Snx25ENSMUSG00000038291Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SNX13 / Q9Y5W8 / sorting nexin 13ENSG0000007118925
SNX14 / Q9Y5W7 / sorting nexin 14ENSG0000013531719


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR003114  Phox-associated domain
 IPR013937  Sorting nexin, C-terminal
 IPR016137  RGS domain
 IPR034905  Sorting nexin-25
 IPR036305  RGS domain superfamily
 IPR036871  PX domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0030512 negative regulation of transforming growth factor beta receptor signaling pathway IMP
 biological_processGO:0032801 receptor catabolic process IMP
 biological_processGO:0060394 negative regulation of pathway-restricted SMAD protein phosphorylation IMP
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0034713 type I transforming growth factor beta receptor binding IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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