ENSG00000113083


Homo sapiens

Features
Gene ID: ENSG00000113083
  
Biological name :LOX
  
Synonyms : LOX / lysyl oxidase / P28300
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: -1
Band: q23.1
Gene start: 122063195
Gene end: 122078360
  
Corresponding Affymetrix probe sets: 204298_s_at (Human Genome U133 Plus 2.0 Array)   213640_s_at (Human Genome U133 Plus 2.0 Array)   215446_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000492324
Ensembl peptide - ENSP00000231004
Ensembl peptide - ENSP00000427538
NCBI entrez gene - 4015     See in Manteia.
OMIM - 153455
RefSeq - NM_001178102
RefSeq - NM_001317073
RefSeq - NM_002317
RefSeq Peptide - NP_002308
RefSeq Peptide - NP_001171573
RefSeq Peptide - NP_001304002
swissprot - P28300
swissprot - H0YAL3
swissprot - D0PNI2
Ensembl - ENSG00000113083
  
Related genetic diseases (OMIM): 617168 - Aortic aneurysm, familial thoracic 10, 617168
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LOXENSGALG00000028063Gallus gallus
 LoxENSMUSG00000024529Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LOXL1 / Q08397 / lysyl oxidase like 1ENSG0000012903853
LOXL3 / P58215 / lysyl oxidase like 3ENSG0000011531833
LOXL2 / Q9Y4K0 / lysyl oxidase like 2ENSG0000013401332
LOXL4 / Q96JB6 / lysyl oxidase like 4ENSG0000013813132
CD6 / P30203 / CD6 moleculeENSG0000001372510
MARCO / Q9UEW3 / macrophage receptor with collagenous structureENSG000000191695
MSR1 / P21757 / macrophage scavenger receptor 1ENSG000000389454
Q6ZMJ2 / SCARA5 / scavenger receptor class A member 5ENSG000001680793


Protein motifs (from Interpro)
Interpro ID Name
 IPR001695  Lysyl oxidase
 IPR013783  Immunoglobulin-like fold
 IPR019828  Lysyl oxidase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001568 blood vessel development IEA
 biological_processGO:0006464 cellular protein modification process TAS
 biological_processGO:0007507 heart development IEA
 biological_processGO:0009725 response to hormone IEA
 biological_processGO:0030198 extracellular matrix organization TAS
 biological_processGO:0030199 collagen fibril organization IEA
 biological_processGO:0030324 lung development IEA
 biological_processGO:0035904 aorta development IEA
 biological_processGO:0042060 wound healing IEA
 biological_processGO:0042493 response to drug IEA
 biological_processGO:0048251 elastic fiber assembly IEA
 biological_processGO:0048514 blood vessel morphogenesis ISS
 biological_processGO:0048545 response to steroid hormone IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005581 collagen trimer IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0004720 protein-lysine 6-oxidase activity TAS
 molecular_functionGO:0005507 copper ion binding TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Elastic fibre formation
Crosslinking of collagen fibrils


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000023 Inguinal hernia 
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 HP:0000098 Increased body height 
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000278 Retrognathia 
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 HP:0000316 Hypertelorism 
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 HP:0000525 Abnormality of the iris "An abnormality of the iris, which is the pigmented muscular tissue between the cornea and the lens, that is perforated by an opening called the pupil." [HPO:curators]
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 HP:0000545 Myopia 
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 HP:0000678 Dental overcrowding 
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 HP:0000766 Abnormality of the sternum 
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 HP:0000822 Hypertension "High blood pressure." [HPO:curators]
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 HP:0000965 Cutis marmorata 
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 HP:0000978 Ecchymoses 
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 HP:0001166 Arachnodactyly "Abnormally long and slender fingers ("spider fingers")." [HPO:curators]
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 HP:0001382 Joint hypermobility "The ability of a joint to move beyond its normal range of motion." [HPO:curators]
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 HP:0001519 Dolichostenomelia "A tall and slim body build with increased arm span to height ratio (>1.05) and a reduced upper-to-lower segment ratio (<0.85), i.e., unusually long arms and legs. The extremities as well as the hands and feet are unusually slim." [HPO:curators]
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 HP:0001640 Cardiomegaly 
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 HP:0001643 Patent ductus arteriosus 
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 HP:0001647 Bicuspid aortic valve "The presence of a bicuspid `aortic valve` (FMA:7236)." [HPO:probinson]
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 HP:0001653 Mitral regurgitation "An `abnormality of the mitral valve` (HP:0001633) characterized by insufficiency or incompetence of the mitral valve resulting in retrograde leaking of blood through the mitral valve upon ventricular contraction." [HPO:probinson]
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 HP:0001659 Aortic insufficiency "An insufficiency of the aortic valve, leading to regurgitation (backward flow) of blood from the aorta into the left ventricle." [HPO:curators]
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 HP:0001677 Coronary artery disease 
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 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
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 HP:0002105 Hemoptysis "Coughing up (expectoration) of blood or blood-streaked sputum from the larynx, trachea, bronchi, or lungs." [HPO:curators]
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 HP:0002107 Pneumothorax 
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 HP:0002138 Subarachnoid hemorrhage 
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 HP:0002140 Ischemic stroke 
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 HP:0002326 Transient ischemic attack 
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 HP:0002616 Aortic root dilatation 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002686 Prenatal maternal abnormality 
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 HP:0002705 High, narrow palate "The presence of a high and narrow palate." [HPO:curators]
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 HP:0002875 Exertional dyspnea 
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 HP:0004933 ascending aortic dissection 
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 HP:0004944 Cerebral aneurysm "The presence of a localized dilatation or ballooning of a cerebral artery." [HPO:curators]
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 HP:0004950 Peripheral arterial disease 
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 HP:0004959 Dilatation of the descending thoracic aorta 
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 HP:0005112 Dilatation of the abdominal aorta 
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 HP:0005162 Impaired left ventricular function 
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 HP:0011106 Hypovolemia "An decrease in the amount of intravascular fluid, particularly in the volume of the circulating blood." [HPO:probinson]
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 HP:0012163 Carotid artery aneurysm "A aneurysm (balooning or bulging out of the vessel wall) of a carotid artery." [HPO:probinson]
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 HP:0012499 Descending aortic dissection "A separation of the layers within the wall of the `descending aorta` (FMA:3784). Tears in the intimal layer result in the propagation of dissection (proximally or distally) secondary to blood entering the intima-media space." [HPO:probinson]
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 HP:0012763 Paroxysmal dyspnea "A sudden attack of dyspnea that occurs while the affected person is at rest." [HPO:probinson]
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 HP:0100749 Chest pain 
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 HP:0100775 Dural ectasia "A widening or ballooning of the dural sac surrounding the spinal cord usually at the lumbosacral level." [HPO:sdoelken]
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 HP:0200146 Cystic medial necrosis of the aorta 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000038295 TLL1 / O43897 / tolloid like 1  / reaction
 ENSG00000049540 ELN / P15502 / elastin  / reaction
 ENSG00000138829 FBN2 / P35556 / fibrillin 2  / reaction
 ENSG00000140092 FBLN5 / Q9UBX5 / fibulin 5  / reaction
 ENSG00000166147 FBN1 / P35555 / fibrillin 1  / reaction
 ENSG00000197614 MFAP5 / Q13361 / microfibril associated protein 5  / reaction
 ENSG00000117122 MFAP2 / P55001 / microfibril associated protein 2  / reaction
 ENSG00000168487 BMP1 / P13497 / bone morphogenetic protein 1  / reaction






 

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