ENSG00000113282


Homo sapiens

Features
Gene ID: ENSG00000113282
  
Biological name :CLINT1
  
Synonyms : clathrin interactor 1 / CLINT1 / Q14677
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: -1
Band: q33.3
Gene start: 157785743
Gene end: 157859175
  
Corresponding Affymetrix probe sets: 201768_s_at (Human Genome U133 Plus 2.0 Array)   201769_at (Human Genome U133 Plus 2.0 Array)   230609_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000433013
Ensembl peptide - ENSP00000431858
Ensembl peptide - ENSP00000433419
Ensembl peptide - ENSP00000434334
Ensembl peptide - ENSP00000388340
Ensembl peptide - ENSP00000429345
Ensembl peptide - ENSP00000429824
NCBI entrez gene - 9685     See in Manteia.
OMIM - 607265
RefSeq - XM_017010088
RefSeq - NM_001195555
RefSeq - NM_001195556
RefSeq - NM_014666
RefSeq - XM_011534701
RefSeq - XM_017010087
RefSeq Peptide - NP_001182484
RefSeq Peptide - NP_001182485
RefSeq Peptide - NP_055481
swissprot - H0YCL3
swissprot - H0YD52
swissprot - H0YDU9
swissprot - A0A0S2Z5H3
swissprot - A0A0S2Z4Y4
swissprot - Q14677
Ensembl - ENSG00000113282
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clint1aENSDARG00000025535Danio rerio
 clint1bENSDARG00000089914Danio rerio
 CLINT1ENSGALG00000003702Gallus gallus
 Clint1ENSMUSG00000006169Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
EPN3 / Q9H201 / epsin 3ENSG0000004928325
EPN2 / O95208 / epsin 2ENSG0000007213424
EPN1 / Q9Y6I3 / epsin 1ENSG0000006324521
ENTHD1 / Q8IYW4 / ENTH domain containing 1ENSG0000017617717


Protein motifs (from Interpro)
Interpro ID Name
 IPR008942  ENTH/VHS
 IPR013809  ENTH domain
 IPR030544  Clathrin interactor 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006897 endocytosis IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0048268 clathrin coat assembly IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030136 clathrin-coated vesicle IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0030276 clathrin binding IPI
 molecular_functionGO:0045296 cadherin binding IDA


Pathways (from Reactome)
Pathway description
Golgi Associated Vesicle Biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000167996 FTH1 / P02794 / ferritin heavy chain 1  / complex
 ENSG00000087086 FTL / P02792 / ferritin light chain  / complex
 ENSG00000134644 PUM1 / Q14671 / pumilio RNA binding family member 1  / complex
 ENSG00000109686 Q5HYK7 / SH3D19 / SH3 domain containing 19  / complex






 

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