ENSG00000144278


Homo sapiens

Features
Gene ID: ENSG00000144278
  
Biological name :GALNT13
  
Synonyms : GALNT13 / polypeptide N-acetylgalactosaminyltransferase 13 / Q8IUC8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: q23.3
Gene start: 153871913
Gene end: 154453849
  
Corresponding Affymetrix probe sets: 234472_at (Human Genome U133 Plus 2.0 Array)   236536_at (Human Genome U133 Plus 2.0 Array)   243779_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000406237
Ensembl peptide - ENSP00000396612
Ensembl peptide - ENSP00000414403
Ensembl peptide - ENSP00000376570
Ensembl peptide - ENSP00000387239
Ensembl peptide - ENSP00000389447
Ensembl peptide - ENSP00000391469
NCBI entrez gene - 114805     See in Manteia.
OMIM - 608369
RefSeq - XM_017003263
RefSeq - NM_052917
RefSeq - XM_011510537
RefSeq - XM_011510538
RefSeq - XM_017003258
RefSeq - XM_017003259
RefSeq - XM_017003260
RefSeq - XM_017003261
RefSeq - XM_017003262
RefSeq - NM_001301627
RefSeq Peptide - NP_001288556
RefSeq Peptide - NP_443149
swissprot - H7C0T6
swissprot - H7C2I5
swissprot - H7BZG2
swissprot - C9JLI4
swissprot - Q8IUC8
swissprot - H7BZU4
Ensembl - ENSG00000144278
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 galnt13ENSDARG00000099227Danio rerio
 GALNT13ENSGALG00000012536Gallus gallus
 Q8CF93ENSMUSG00000060988Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GALNT1 / Q10472 / polypeptide N-acetylgalactosaminyltransferase 1ENSG0000014142982
GALNT3 / Q14435 / polypeptide N-acetylgalactosaminyltransferase 3ENSG0000011533944
GALNT6 / Q8NCL4 / polypeptide N-acetylgalactosaminyltransferase 6ENSG0000013962944
Q8IXK2 / GALNT12 / polypeptide N-acetylgalactosaminyltransferase 12ENSG0000011951442
GALNT4 / Q8N4A0 / polypeptide N-acetylgalactosaminyltransferase 4ENSG0000025759442
POC1B-GALNT4 / POC1B-GALNT4 readthroughENSG0000025907542
Q8NCW6 / GALNT11 / polypeptide N-acetylgalactosaminyltransferase 11ENSG0000017823441
GALNT2 / Q10471 / polypeptide N-acetylgalactosaminyltransferase 2ENSG0000014364139
Q8N428 / GALNT16 / polypeptide N-acetylgalactosaminyltransferase 16ENSG0000010062637
GALNT5 / Q7Z7M9 / polypeptide N-acetylgalactosaminyltransferase 5ENSG0000013654237
Q96FL9 / GALNT14 / polypeptide N-acetylgalactosaminyltransferase 14ENSG0000015808937
Q7Z4T8 / GALNTL5 / polypeptide N-acetylgalactosaminyltransferase like 5ENSG0000010664830


Protein motifs (from Interpro)
Interpro ID Name
 IPR000772  Ricin B, lectin domain
 IPR001173  Glycosyltransferase 2-like
 IPR029044  Nucleotide-diphospho-sugar transferases
 IPR035992  Ricin B-like lectins


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0006493 protein O-linked glycosylation IEA
 biological_processGO:0016266 O-glycan processing TAS
 biological_processGO:0018242 protein O-linked glycosylation via serine IDA
 biological_processGO:0018243 protein O-linked glycosylation via threonine IDA
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004653 polypeptide N-acetylgalactosaminyltransferase activity TAS
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0030246 carbohydrate binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
O-linked glycosylation of mucins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr