ENSG00000151379


Homo sapiens

Features
Gene ID: ENSG00000151379
  
Biological name :MSGN1
  
Synonyms : A6NI15 / mesogenin 1 / MSGN1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: p24.2
Gene start: 17816496
Gene end: 17817101
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSP00000281047
NCBI entrez gene - 343930     See in Manteia.
OMIM - 612209
RefSeq - NM_001105569
RefSeq Peptide - NP_001099039
swissprot - A6NI15
Ensembl - ENSG00000151379
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 msgn1ENSDARG00000070546Danio rerio
 MSGN1ENSGALG00000016469Gallus gallus
 Msgn1ENSMUSG00000047002Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MESP1 / Q9BRJ9 / mesoderm posterior bHLH transcription factor 1ENSG0000016682327
MESP2 / Q0VG99 / mesoderm posterior bHLH transcription factor 2ENSG0000018809527


Protein motifs (from Interpro)
Interpro ID Name
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain
 IPR036638  Helix-loop-helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001707 mesoderm formation IBA
 biological_processGO:0001756 somitogenesis IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007379 segment specification IEA
 biological_processGO:0009880 embryonic pattern specification IBA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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