ENSGALG00000016469


Gallus gallus

Features
Gene ID: ENSGALG00000016469
  
Biological name :MSGN1
  
Synonyms : Mesogenin-1 / MSGN1 / Q9DEQ9
  
Possible biological names infered from orthology : A6NI15 / Q9JK54
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 100663686
Gene end: 100664992
  
Corresponding Affymetrix probe sets: Gga.225.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000026522
NCBI entrez gene - 395419     See in Manteia.
RefSeq - NM_204684
RefSeq Peptide - NP_990015
swissprot - A0A0A0MQ57
swissprot - Q9DEQ9
Ensembl - ENSGALG00000016469
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 msgn1ENSDARG00000070546Danio rerio
 MSGN1ENSG00000151379Homo sapiens
 Msgn1ENSMUSG00000047002Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MESP1 / mesoderm posterior protein 1 / MESP2* / P97309* / Q0VG99* / Q9BRJ9* / mesoderm posterior bHLH transcription factor 1* / mesoderm posterior bHLH transcription factor 2*ENSGALG0000002646731
MESP1* / MESP2* / Q9BRJ9* / P97309* / Q0VG99* / Mesoderm posterior protein 1 * / mesoderm posterior bHLH transcription factor 1* / mesoderm posterior bHLH transcription factor 2*ENSGALG0000000827526


Protein motifs (from Interpro)
Interpro ID Name
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001707 mesoderm formation IBA
 biological_processGO:0001756 somitogenesis IBA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007379 segment specification IEA
 biological_processGO:0009880 embryonic pattern specification IBA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr