ENSG00000156222


Homo sapiens

Features
Gene ID: ENSG00000156222
  
Biological name :SLC28A1
  
Synonyms : O00337 / SLC28A1 / solute carrier family 28 member 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: 1
Band: q25.3
Gene start: 84884654
Gene end: 84945796
  
Corresponding Affymetrix probe sets: 207560_at (Human Genome U133 Plus 2.0 Array)   231187_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000286749
Ensembl peptide - ENSP00000341629
Ensembl peptide - ENSP00000378074
Ensembl peptide - ENSP00000443752
NCBI entrez gene - 9154     See in Manteia.
OMIM - 606207
RefSeq - NM_201651
RefSeq - XM_017022723
RefSeq - NM_001287761
RefSeq - NM_001287762
RefSeq - NM_001321721
RefSeq - NM_001321722
RefSeq - NM_004213
RefSeq - XM_011522210
RefSeq - XM_011522211
RefSeq - XM_011522212
RefSeq - XM_011522214
RefSeq - XM_011522215
RefSeq - XM_011522216
RefSeq - XM_011522217
RefSeq - XM_011522218
RefSeq - XM_011522203
RefSeq - XM_011522204
RefSeq - XM_011522205
RefSeq - XM_011522206
RefSeq - XM_011522207
RefSeq - XM_011522208
RefSeq - XM_011522209
RefSeq Peptide - NP_001274690
RefSeq Peptide - NP_001274691
RefSeq Peptide - NP_001308650
RefSeq Peptide - NP_001308651
RefSeq Peptide - NP_004204
RefSeq Peptide - NP_964014
swissprot - O00337
swissprot - B7Z3L6
Ensembl - ENSG00000156222
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc28a1ENSDARG00000060879Danio rerio
 ENSGALG00000030863Gallus gallus
 Slc28a1ENSMUSG00000025726Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O43868 / SLC28A2 / solute carrier family 28 member 2ENSG0000013786062
Q9HAS3 / SLC28A3 / solute carrier family 28 member 3ENSG0000019750643


Protein motifs (from Interpro)
Interpro ID Name
 IPR002668  Concentrative nucleoside transporter N-terminal domain
 IPR008276  Concentrative nucleoside transporter
 IPR011642  Nucleoside transporter/FeoB GTPase, Gate domain
 IPR011657  Concentrative nucleoside transporter C-terminal domain
 IPR018270  Concentrative nucleoside transporter, metazoan/bacterial
 IPR030212  Concentrative nucleoside transporter CNT1/CNT2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006139 nucleobase-containing compound metabolic process TAS
 biological_processGO:0015855 pyrimidine nucleobase transport IEA
 biological_processGO:0015858 nucleoside transport TAS
 biological_processGO:0072531 pyrimidine-containing compound transmembrane transport IEA
 biological_processGO:1901642 nucleoside transmembrane transport IEA
 biological_processGO:1904823 purine nucleobase transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0016020 membrane TAS
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005337 nucleoside transmembrane transporter activity TAS
 molecular_functionGO:0005415 nucleoside:sodium symporter activity TAS
 molecular_functionGO:0015389 pyrimidine- and adenine-specific:sodium symporter activity IBA


Pathways (from Reactome)
Pathway description
Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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