ENSMUSG00000025726


Mus musculus

Features
Gene ID: ENSMUSG00000025726
  
Biological name :Slc28a1
  
Synonyms : Slc28a1 / solute carrier family 28 (sodium-coupled nucleoside transporter), member 1
  
Possible biological names infered from orthology : O00337 / solute carrier family 28 member 1
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: D3
Gene start: 81114799
Gene end: 81170416
  
Corresponding Affymetrix probe sets: 10554502 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000026820
Ensembl peptide - ENSMUSP00000112421
NCBI entrez gene - 434203     See in Manteia.
MGI - MGI:3605073
RefSeq - XM_006540979
RefSeq - NM_001004184
RefSeq - XM_006540977
RefSeq - XM_006540978
RefSeq - XM_006540976
RefSeq Peptide - NP_001004184
swissprot - E9PXX9
Ensembl - ENSMUSG00000025726
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc28a1ENSDARG00000060879Danio rerio
 ENSGALG00000030863Gallus gallus
 O00337ENSG00000156222Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O88627 / Slc28a2 / Mus musculus solute carrier family 28 (sodium-coupled nucleoside transporter), member 2 (Slc28a2), transcript variant 2, mRNA. / O43868* / solute carrier family 28 member 2*ENSMUSG0000002721961
Gm14085 / O43868* / SLC28A2* / solute carrier family 28 member 2*ENSMUSG0000007907159
Q9ERH8 / Slc28a3 / Solute carrier family 28 member 3 / Q9HAS3*ENSMUSG0000002155344


Protein motifs (from Interpro)
Interpro ID Name
 IPR002668  Concentrative nucleoside transporter N-terminal domain
 IPR008276  Concentrative nucleoside transporter
 IPR011642  Nucleoside transporter/FeoB GTPase, Gate domain
 IPR011657  Concentrative nucleoside transporter C-terminal domain
 IPR018270  Concentrative nucleoside transporter, metazoan/bacterial
 IPR030212  Concentrative nucleoside transporter CNT1/CNT2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015855 pyrimidine nucleobase transport IEA
 biological_processGO:0072531 pyrimidine-containing compound transmembrane transport IEA
 biological_processGO:1901642 nucleoside transmembrane transport IEA
 biological_processGO:1904823 purine nucleobase transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005337 nucleoside transmembrane transporter activity IEA
 molecular_functionGO:0005415 nucleoside:sodium symporter activity IEA
 molecular_functionGO:0015389 pyrimidine- and adenine-specific:sodium symporter activity IBA


Pathways (from Reactome)
Pathway description
Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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