ENSG00000160218


Homo sapiens

Features
Gene ID: ENSG00000160218
  
Biological name :TRAPPC10
  
Synonyms : P48553 / trafficking protein particle complex 10 / TRAPPC10
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 21
Strand: 1
Band: q22.3
Gene start: 44012319
Gene end: 44106552
  
Corresponding Affymetrix probe sets: 1555446_s_at (Human Genome U133 Plus 2.0 Array)   208184_s_at (Human Genome U133 Plus 2.0 Array)   209412_at (Human Genome U133 Plus 2.0 Array)   215269_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000291574
Ensembl peptide - ENSP00000369570
Ensembl peptide - ENSP00000402221
NCBI entrez gene - 7109     See in Manteia.
OMIM - 602103
RefSeq - XM_017028455
RefSeq - NM_003274
RefSeq - XM_011529730
RefSeq - XM_016999834
RefSeq - XM_017028454
RefSeq - XM_005261168
RefSeq - XM_011529714
RefSeq - XM_011529715
RefSeq - XM_011529716
RefSeq - XM_011529717
RefSeq - XM_011529718
RefSeq - XM_011529719
RefSeq - XM_011529720
RefSeq - XM_011529721
RefSeq - XM_011529722
RefSeq - XM_011529723
RefSeq - XM_011529725
RefSeq - XM_011529726
RefSeq - XM_011529727
RefSeq - XM_011529728
RefSeq - XM_011529729
RefSeq Peptide - NP_003265
swissprot - P48553
swissprot - F8WE24
Ensembl - ENSG00000160218
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trappc10ENSDARG00000098118Danio rerio
 ENSGALG00000022804Gallus gallus
 Trappc10ENSMUSG00000000374Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FP565260.7ENSG0000028043316


Protein motifs (from Interpro)
Interpro ID Name
 IPR022233  TRAPP II complex, TRAPPC10


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006814 sodium ion transport TAS
 biological_processGO:0006891 intra-Golgi vesicle-mediated transport IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0034498 early endosome to Golgi transport IBA
 biological_processGO:0035725 sodium ion transmembrane transport IEA
 biological_processGO:0048208 COPII vesicle coating TAS
 biological_processGO:0051259 protein complex oligomerization IDA
 biological_processGO:0065009 regulation of molecular function IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0016021 integral component of membrane TAS
 cellular_componentGO:0030008 TRAPP complex IDA
 cellular_componentGO:1990071 TRAPPII protein complex IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0015081 sodium ion transmembrane transporter activity TAS
 molecular_functionGO:0017112 Rab guanyl-nucleotide exchange factor activity TAS


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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