ENSGALG00000022804


Gallus gallus
transportcomplextetratricopeptide-likehelicaldomainsuperfamilyfoiegrasliverhealthfamilytrappiitrappcintra-golgivesicle-mediatedearlyendosomegolgicytosoltrappiiproteincopii-mediatedvesiclerabgefsexchangegtpgdprabs

Features
Gene ID: ENSGALG00000022804
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : FP565260.7 / P48553 / trafficking protein particle complex 10 / TRAPPC10
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 110273694
Gene end: 110314009
  
Corresponding Affymetrix probe sets: GgaAffx.24415.1.S1_at (Chicken Array)   GgaAffx.9143.2.S1_at (Chicken Array)   GgaAffx.9143.3.S1_s_at (Chicken Array)   GgaAffx.9143.4.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000035897
NCBI entrez gene - 771556     See in Manteia.
RefSeq - XM_003640505
RefSeq - XM_015300788
swissprot - E1C7Y6
Ensembl - ENSGALG00000022804
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trappc10ENSDARG00000098118Danio rerio
 FP565260.7ENSG00000280433Homo sapiens
 P48553ENSG00000160218Homo sapiens
 Trappc10ENSMUSG00000000374Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR021773  Foie gras liver health family 1
 IPR022233  TRAPP II complex, TRAPPC10


Gene Ontology (GO)
establishment of localizationcellular localizationestablishment of localizationcellular localizationestablishment of localizationcellular localizationestablishment of localizationcellular localizationestablishment of localizationcellular localizationestablishment of localizationcellular localizationestablishment of localizationcellular localizationestablishment of localizationcellular localizationestablishment of localizationcellular localizationestablishment of localizationcellular localizationestablishment of localizationestablishment of localizationcellular localizationcellular localization
cellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellcellprotein-containing complexprotein-containing complexorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0006891 intra-Golgi vesicle-mediated transport IBA
 biological_processGO:0034498 early endosome to Golgi transport IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:1990071 TRAPPII protein complex IBA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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