ENSG00000162520


Homo sapiens

Features
Gene ID: ENSG00000162520
  
Biological name :SYNC
  
Synonyms : Q9H7C4 / SYNC / syncoilin, intermediate filament protein
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p35.1
Gene start: 32680360
Gene end: 32703596
  
Corresponding Affymetrix probe sets: 221276_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000387594
Ensembl peptide - ENSP00000401975
Ensembl peptide - ENSP00000362583
Ensembl peptide - ENSP00000386439
RefSeq - NM_030786
RefSeq - NM_001161708
RefSeq Peptide - NP_001155180
RefSeq Peptide - NP_110413
swissprot - Q9H7C4
swissprot - C9JTN4
swissprot - C9JSS1
Ensembl - ENSG00000162520
  
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 syncENSDARG00000035944Danio rerio
 SYNCENSGALG00000003529Gallus gallus
 SyncENSMUSG00000001333Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR027267  AH/BAR domain superfamily
 IPR027702  Syncoilin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045103 intermediate filament-based process IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0030018 Z disc IEA
 cellular_componentGO:0031594 neuromuscular junction IEA
 cellular_componentGO:0042383 sarcolemma IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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