ENSG00000164600


Homo sapiens

Features
Gene ID: ENSG00000164600
  
Biological name :NEUROD6
  
Synonyms : NEUROD6 / neuronal differentiation 6 / Q96NK8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: -1
Band: p14.3
Gene start: 31337461
Gene end: 31340894
  
Corresponding Affymetrix probe sets: 220045_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000297142
NCBI entrez gene - 63974     See in Manteia.
OMIM - 611513
RefSeq - NM_022728
RefSeq Peptide - NP_073565
swissprot - A0A090N7T3
swissprot - Q96NK8
Ensembl - ENSG00000164600
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6NYU3ENSDARG00000040008Danio rerio
 Q9W6C7ENSDARG00000020794Danio rerio
 P48986ENSMUSG00000037984Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q13562 / NEUROD1 / neuronal differentiation 1ENSG0000016299251
Q15784 / NEUROD2 / neuronal differentiation 2ENSG0000017153250
Q9HD90 / NEUROD4 / neuronal differentiation 4ENSG0000012330742
Q9H2A3 / NEUROG2 / neurogenin 2ENSG0000017840319
Q9Y4Z2 / NEUROG3 / neurogenin 3ENSG0000012285918
Q92886 / NEUROG1 / neurogenin 1ENSG0000018196518
ATOH1 / Q92858 / atonal bHLH transcription factor 1ENSG0000017223815
ATOH8 / Q96SQ7 / atonal bHLH transcription factor 8ENSG0000016887414
Q7RTS1 / BHLHA15 / basic helix-loop-helix family member a15ENSG0000018053514
ATOH7 / Q8N100 / atonal bHLH transcription factor 7ENSG0000017977412


Protein motifs (from Interpro)
Interpro ID Name
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain
 IPR016637  Neurogenic differentiation factor NeuroD
 IPR022575  Neurogenic differentiation factor, domain of unknown function
 IPR032650  Neurogenic differentiation factor 6
 IPR036638  Helix-loop-helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0021542 dentate gyrus development IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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