ENSG00000164900


Homo sapiens

Features
Gene ID: ENSG00000164900
  
Biological name :GBX1
  
Synonyms : gastrulation brain homeobox 1 / GBX1 / Q14549
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: -1
Band: q36.1
Gene start: 151148589
Gene end: 151174745
  
Corresponding Affymetrix probe sets: 217011_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000297537
NCBI entrez gene - 2636     See in Manteia.
OMIM - 603354
RefSeq - NM_001098834
RefSeq Peptide - NP_001092304
swissprot - Q14549
Ensembl - ENSG00000164900
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gbx1ENSDARG00000071418Danio rerio
 GBX1ENSGALG00000042241Gallus gallus
 Gbx1ENSMUSG00000067724Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GBX2 / P52951 / gastrulation brain homeobox 2ENSG0000016850548
MNX1 / P50219 / motor neuron and pancreas homeobox 1ENSG0000013067525
NKX1-1 / Q15270 / NK1 homeobox 1ENSG0000023560819
EVX1 / P49640 / even-skipped homeobox 1ENSG0000010603818
MEOX1 / P50221 / mesenchyme homeobox 1ENSG0000000510217
NKX1-2 / Q9UD57 / NK1 homeobox 2ENSG0000022954417
EVX2 / Q03828 / even-skipped homeobox 2ENSG0000017427916
MEOX2 / P50222 / mesenchyme homeobox 2ENSG0000010651115
VENTX / O95231 / VENT homeoboxENSG0000015165013


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa
 IPR031251  Homeobox protein GBX-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007628 adult walking behavior IEA
 biological_processGO:0019230 proprioception IEA
 biological_processGO:0021522 spinal cord motor neuron differentiation IEA
 biological_processGO:0048663 neuron fate commitment IEA
 biological_processGO:0097374 sensory neuron axon guidance IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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