ENSG00000167118


Homo sapiens

Features
Gene ID: ENSG00000167118
  
Biological name :URM1
  
Synonyms : Q9BTM9 / ubiquitin related modifier 1 / URM1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: 1
Band: q34.11
Gene start: 128371319
Gene end: 128392016
  
Corresponding Affymetrix probe sets: 208101_s_at (Human Genome U133 Plus 2.0 Array)   228626_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000361938
Ensembl peptide - ENSP00000361944
Ensembl peptide - ENSP00000412922
Ensembl peptide - ENSP00000435186
Ensembl peptide - ENSP00000361941
NCBI entrez gene - 81605     See in Manteia.
OMIM - 612693
RefSeq - NM_001135947
RefSeq - NM_001265582
RefSeq - NM_030914
RefSeq Peptide - NP_001129419
RefSeq Peptide - NP_001252511
RefSeq Peptide - NP_112176
swissprot - Q9BTM9
swissprot - A0A024R8C7
swissprot - Q5T4A9
Ensembl - ENSG00000167118
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 urm1ENSDARG00000091198Danio rerio
 URM1ENSGALG00000004971Gallus gallus
 Urm1ENSMUSG00000069020Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR012675  Beta-grasp domain superfamily
 IPR015221  Ubiquitin-related modifier 1
 IPR016155  Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002098 tRNA wobble uridine modification IMP
 biological_processGO:0006400 tRNA modification TAS
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0032447 protein urmylation IEA
 biological_processGO:0034227 tRNA thio-modification IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016783 sulfurtransferase activity IDA


Pathways (from Reactome)
Pathway description
tRNA modification in the nucleus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000174177 CTU2 / Q2VPK5 / cytosolic thiouridylase subunit 2  / complex
 ENSG00000142544 CTU1 / Q7Z7A3 / cytosolic thiouridylase subunit 1  / complex






 

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