ENSG00000169908


Homo sapiens

Features
Gene ID: ENSG00000169908
  
Biological name :TM4SF1
  
Synonyms : P30408 / TM4SF1 / transmembrane 4 L six family member 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: q25.1
Gene start: 149369022
Gene end: 149377865
  
Corresponding Affymetrix probe sets: 209386_at (Human Genome U133 Plus 2.0 Array)   209387_s_at (Human Genome U133 Plus 2.0 Array)   215033_at (Human Genome U133 Plus 2.0 Array)   215034_s_at (Human Genome U133 Plus 2.0 Array)   238168_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000418025
Ensembl peptide - ENSP00000419426
Ensembl peptide - ENSP00000304277
Ensembl peptide - ENSP00000417084
NCBI entrez gene - 4071     See in Manteia.
OMIM - 191155
RefSeq - NM_014220
RefSeq - XM_017006385
RefSeq Peptide - NP_055035
swissprot - F8WF27
swissprot - C9J611
swissprot - P30408
swissprot - F8WBG6
Ensembl - ENSG00000169908
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tm4sf18ENSDARG00000060668Danio rerio
 Q64302ENSMUSG00000027800Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P48230 / TM4SF4 / transmembrane 4 L six family member 4ENSG0000016990349
O14894 / TM4SF5 / transmembrane 4 L six family member 5ENSG0000014248446
Q96CE8 / TM4SF18 / transmembrane 4 L six family member 18ENSG0000016376245
Q96DZ7 / TM4SF19 / transmembrane 4 L six family member 19ENSG0000014510730
TM4SF19-TCTEX1D2 / TM4SF19-TCTEX1D2 readthrough (NMD candidate)ENSG0000027333130


Protein motifs (from Interpro)
Interpro ID Name
 IPR008661  L6 membrane


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005887 integral component of plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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