ENSDARG00000060668


Danio rerio
membranetm4sf18lintegralcomponent

Features
Gene ID: ENSDARG00000060668
  
Biological name :tm4sf18
  
Synonyms : tm4sf18 / transmembrane 4 L six family member 18
  
Possible biological names infered from orthology : Mus musculus transmembrane 4 superfamily member 1 (Tm4sf1), transcript variant 2, mRNA. / P30408 / Q64302 / Q96CE8 / TM4SF1 / transmembrane 4 L six family member 1
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 38159823
Gene end: 38168571
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000115245
Ensembl peptide - ENSDARP00000095300
NCBI entrez gene - 563601     See in Manteia.
RefSeq - NM_001045022
RefSeq Peptide - NP_001038487
swissprot - E7FBS4
swissprot - Q1MT26
ZFIN ID - ZDB-GENE-050208-690
Ensembl - ENSDARG00000060668
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TM4SF1ENSGALG00000038747Gallus gallus
 P30408ENSG00000169908Homo sapiens
 Q96CE8ENSG00000163762Homo sapiens
 Q64302ENSMUSG00000027800Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tm4sf4 / transmembrane 4 L six family member 4 / P48230* / transmembrane 4 superfamily member 4*ENSDARG0000004074741
tm4sf5 / transmembrane 4 L six family member 5 / O14894* / transmembrane 4 superfamily member 5*ENSDARG0000005518540
zgc:172079ENSDARG0000005676236
zgc:172079ENSDARG0000010564436
CABZ01033205.1 / Danio rerio uncharacterized LOC100002960 (LOC100002960), mRNA.ENSDARG0000009094335
si:ch211-137i24.10ENSDARG0000005770633
TM4SF19 / si:dkey-83h2.3 / Q96DZ7* / TM4SF19-TCTEX1D2* / transmembrane 4 L six family member 19* / TM4SF19-TCTEX1D2 readthrough (NMD candidate)*ENSDARG0000010037828


Protein motifs (from Interpro)
Interpro ID Name
 IPR008661  L6 membrane


Gene Ontology (GO)
membranemembranemembranemembranemembranemembranemembranemembranemembranemembranemembranemembrane
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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