ENSDARG00000040747


Danio rerio

Features
Gene ID: ENSDARG00000040747
  
Biological name :tm4sf4
  
Synonyms : tm4sf4 / transmembrane 4 L six family member 4
  
Possible biological names infered from orthology : P48230 / transmembrane 4 superfamily member 4
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 38127467
Gene end: 38137908
  
Corresponding Affymetrix probe sets: Dr.3563.1.A1_at (Zebrafish Array)   Dr.3563.2.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000095301
NCBI entrez gene - 445095     See in Manteia.
swissprot - Q6DBQ4
ZFIN ID - ZDB-GENE-040801-231
Ensembl - ENSDARG00000040747
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TM4SF4ENSGALG00000010427Gallus gallus
 P48230ENSG00000169903Homo sapiens
 Tm4sf4ENSMUSG00000027801Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:172079ENSDARG0000005676244
si:ch211-137i24.10ENSDARG0000005770644
zgc:172079ENSDARG0000010564444
tm4sf18 / transmembrane 4 L six family member 18 / Q64302* / Q96CE8* / TM4SF1* / P30408* / transmembrane 4 L six family member 1* / Mus musculus transmembrane 4 superfamily member 1 (Tm4sf1...ENSDARG0000006066840
tm4sf5 / transmembrane 4 L six family member 5 / O14894* / transmembrane 4 superfamily member 5*ENSDARG0000005518539
CABZ01033205.1 / Danio rerio uncharacterized LOC100002960 (LOC100002960), mRNA.ENSDARG0000009094338
TM4SF19 / si:dkey-83h2.3 / Q96DZ7* / TM4SF19-TCTEX1D2* / transmembrane 4 L six family member 19* / TM4SF19-TCTEX1D2 readthrough (NMD candidate)*ENSDARG0000010037830


Protein motifs (from Interpro)
Interpro ID Name
 IPR008661  L6 membrane


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031018 endocrine pancreas development IMP
 biological_processGO:0090104 pancreatic epsilon cell differentiation IMP
 biological_processGO:2000077 negative regulation of type B pancreatic cell development IMP
 biological_processGO:2000227 negative regulation of pancreatic A cell differentiation IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0005598 pancreatic epsilon cell pancreatic epsilon cell decreased amount , abnormal
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 ZFA:0009102 pancreatic B cell pancreatic B cell increased amount , abnormal
Show

 ZFA:0009104 pancreatic A cell pancreatic A cell increased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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