ENSMUSG00000027801


Mus musculus

Features
Gene ID: ENSMUSG00000027801
  
Biological name :Tm4sf4
  
Synonyms : Tm4sf4 / transmembrane 4 superfamily member 4
  
Possible biological names infered from orthology : P48230 / transmembrane 4 L six family member 4
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: D
Gene start: 57425314
Gene end: 57441677
  
Corresponding Affymetrix probe sets: 10492174 (MoGene1.0st)   1424962_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000029377
NCBI entrez gene - 229302     See in Manteia.
MGI - MGI:2385173
RefSeq - NM_145539
RefSeq Peptide - NP_663514
swissprot - Q3TMT3
Ensembl - ENSMUSG00000027801
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tm4sf4ENSDARG00000040747Danio rerio
 TM4SF4ENSGALG00000010427Gallus gallus
 P48230ENSG00000169903Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q64302 / Tm4sf1 / Mus musculus transmembrane 4 superfamily member 1 (Tm4sf1), transcript variant 2, mRNA. / P30408* / transmembrane 4 L six family member 1*ENSMUSG0000002780048
Tm4sf5 / transmembrane 4 superfamily member 5 / O14894* / transmembrane 4 L six family member 5*ENSMUSG0000001891942
Tm4sf19 / transmembrane 4 L six family member 19 / Q96DZ7* / TM4SF19-TCTEX1D2* / TM4SF19-TCTEX1D2 readthrough (NMD candidate)*ENSMUSG0000007962529


Protein motifs (from Interpro)
Interpro ID Name
 IPR008661  L6 membrane


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042246 tissue regeneration IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001529 abnormal vocalization "an inability, decreased ability or altered ability to produce sound from the vocal organs; or a general increase or decrease in the production of vocal sound" [cml:Cathleen M. Lutz , Mouse Genome Informatics Curator, J:85479]
Show

Allelic Composition: Syt1tm1a(EUCOMM)Wtsi/Syt1tm1a(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Syt1tm1a(EUCOMM)Wtsi/Wtsi

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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