ENSG00000169919


Homo sapiens

Features
Gene ID: ENSG00000169919
  
Biological name :GUSB
  
Synonyms : glucuronidase beta / GUSB / P08236
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: -1
Band: q11.21
Gene start: 65960684
Gene end: 65982314
  
Corresponding Affymetrix probe sets: 202605_at (Human Genome U133 Plus 2.0 Array)   230125_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000391390
Ensembl peptide - ENSP00000411859
Ensembl peptide - ENSP00000416793
Ensembl peptide - ENSP00000302728
Ensembl peptide - ENSP00000411262
NCBI entrez gene - 2990     See in Manteia.
OMIM - 611499
RefSeq - XM_017012093
RefSeq - NM_001293104
RefSeq - NM_001293105
RefSeq - XM_005250297
RefSeq - XM_011516113
RefSeq - XM_011516114
RefSeq - XM_017012091
RefSeq - XM_017012092
RefSeq - NM_000181
RefSeq - NM_001284290
RefSeq Peptide - NP_001280034
RefSeq Peptide - NP_000172
RefSeq Peptide - NP_001271219
RefSeq Peptide - NP_001280033
swissprot - P08236
swissprot - F8WBK6
swissprot - F2Z3L6
Ensembl - ENSG00000169919
  
Related genetic diseases (OMIM): 253220 - Mucopolysaccharidosis VII, 253220
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gusbENSDARG00000063126Danio rerio
 GUSBENSGALG00000002542Gallus gallus
 GusbENSMUSG00000025534Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006101  Glycoside hydrolase, family 2
 IPR006102  Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich
 IPR006103  Glycoside hydrolase family 2, catalytic domain
 IPR006104  Glycosyl hydrolases family 2, sugar binding domain
 IPR008979  Galactose-binding-like domain superfamily
 IPR013783  Immunoglobulin-like fold
 IPR017853  Glycoside hydrolase superfamily
 IPR023230  Glycoside hydrolase, family 2, conserved site
 IPR023232  Glycoside hydrolase, family 2, active site
 IPR036156  Beta-Galactosidase/glucuronidase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process TAS
 biological_processGO:0006027 glycosaminoglycan catabolic process TAS
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0030214 hyaluronan catabolic process TAS
 biological_processGO:0043312 neutrophil degranulation TAS
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0005764 lysosome IBA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0035578 azurophil granule lumen TAS
 cellular_componentGO:0043202 lysosomal lumen TAS
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:1904813 ficolin-1-rich granule lumen TAS
 molecular_functionGO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IBA
 molecular_functionGO:0004566 beta-glucuronidase activity TAS
 molecular_functionGO:0005102 signaling receptor binding IPI
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016798 hydrolase activity, acting on glycosyl bonds IEA
 molecular_functionGO:0019904 protein domain specific binding IPI


Pathways (from Reactome)
Pathway description
HS-GAG degradation
Hyaluronan uptake and degradation
MPS VII - Sly syndrome
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000023 Inguinal hernia 
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 HP:0000238 Hydrocephalus 
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 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
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 HP:0000280 Coarse facial features 
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 HP:0000365 Hearing loss 
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 HP:0000470 Short neck 
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 HP:0000768 Pectus carinatum "A deformity of the chest caused by overgrowth of the ribs and characterized by protrusion of the sternum." [HPO:curators]
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 HP:0000926 Platyspondyly 
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 HP:0000943 Dysostosis multiplex 
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 HP:0001004 Lymphedema 
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 HP:0001007 Hirsutism "Abnormally increased hair growth." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001371 Contractures 
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 HP:0001387 Joint stiffness "Joint stiffness is a perceived sensation of tightness in a joint or joints when attempting to move them after a period of inactivity. Joint stiffness typically subsides over time." [HPO:curators]
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 HP:0001537 Umbilical hernia "Protrusion of abdominal contents through a defect in the abdominal wall musculature around the umbilicus. Skin and subcutaneous tissue overlie the defect." [HPO:curators]
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 HP:0001541 Ascites 
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 HP:0001654 Abnormality of the heart valves "An abnormality of a `Cardiac valve` (FMA:7110)." [HPO:probinson]
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001789 Hydrops fetalis 
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 HP:0001840 Metatarsus varus "Metatarsus varus (adductus) is one of the most common foot deformities, that is defined as a transverse plane deformity in Lisfranc s (tarsometatarsal) joints in which the metatarsals are deviated medially. The relationship between talus and calcaneus is normal. On inspection the toes angle abruptly towards the midline, creating a C-shaped lateral foot border with a prominent styloid process of the 5th metatarsal. The result is that the forefoot is twisted inwards relative to the heel, so that the sole faces the midline." [HPO:curators]
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 HP:0002103 Abnormality of the pleura "An abnormality of the pleura, the thin, transparent membrane which covers the lungs and lines the inside of the chest walls." [HPO:curators]
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 HP:0002180 Neurodegeneration 
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002680 J-shaped sella turcica "A deformity of the sella turcica whereby the sella extends further anterior than normal such that the anterior clinoid process appears to overhang it, giving the appearance of the letter J on imaging of the skull." [HPO:curators]
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 HP:0003272 Abnormality of the hip "An abnormality of the hip joint or the surrounding anatomic region." [HPO:curators]
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 HP:0003311 Hypoplastic odontoid process 
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 HP:0003375 Narrow greater sacrosciatic notches "A narrowing of the sacrosciatic notch, i.e., the deep indentation in the posterior border of the hip bone at the point of union of the ilium and ischium." [HPO:curators]
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 HP:0003541 Dermatan and heparan sulfate excretion in urine 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004607 anterior beaking of lower thoracic and lumbar vertebrae 
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 HP:0005019 Diaphyseal thickening 
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 HP:0005619 Thoracolumbar kyphosis 
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 HP:0006119 Proximal tapering of metacarpals "Some or all of the metacarpal bones (i.e., metacarpal II to V) have a pointed proximal appearance." [HPO:sdoelken]
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 HP:0007957 Variable degree of corneal opacities 
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 HP:0008155 Acid mucopolysacchariduria 
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 HP:0008301 Dermatan sulfate excretion in urine 
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 HP:0008430 Mild anterior beaking of lumbar vertebrae 
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 HP:0008807 Acetabular dysplasia 
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 HP:0008897 Growth retardation, progressive 
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 HP:0010655 Stippling of the epiphyses "The presence of abnormal punctate (speckled, dot-like) calcifications in the epiphyses (FMA:24012)." [HPO:curators]
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 HP:0012115 Hepatitis "Inflammation of the liver." [HPO:probinson]
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 HP:0012368 Flat face "Absence of concavity or convexity of the face when viewed in profile." [pmid:19125436]
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 HP:0100026 Arteriovenous malformations 
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 HP:0100625 Enlarged thorax 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000169919 GUSB / P08236 / glucuronidase beta  / complex






 

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