ENSG00000172888


Homo sapiens

Features
Gene ID: ENSG00000172888
  
Biological name :ZNF621
  
Synonyms : Q6ZSS3 / zinc finger protein 621 / ZNF621
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p22.1
Gene start: 40524878
Gene end: 40574685
  
Corresponding Affymetrix probe sets: 1558620_at (Human Genome U133 Plus 2.0 Array)   230164_at (Human Genome U133 Plus 2.0 Array)   241499_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000408779
Ensembl peptide - ENSP00000413236
Ensembl peptide - ENSP00000312144
Ensembl peptide - ENSP00000340841
Ensembl peptide - ENSP00000386051
NCBI entrez gene - 285268     See in Manteia.
RefSeq - XM_017006226
RefSeq - NM_001098414
RefSeq - NM_001287245
RefSeq - NM_198484
RefSeq - XM_005265079
RefSeq - XM_005265080
RefSeq Peptide - NP_001274174
RefSeq Peptide - NP_940886
RefSeq Peptide - NP_001091884
swissprot - C9JZC2
swissprot - Q6ZSS3
swissprot - C9JM43
Ensembl - ENSG00000172888
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8N2I2 / ZNF619 / zinc finger protein 619ENSG0000017787357
Q6ZNG0 / ZNF620 / zinc finger protein 620ENSG0000017784249
Q6ZS27 / ZNF662 / zinc finger protein 662ENSG0000018298342


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016607 nuclear speck IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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