ENSG00000177842


Homo sapiens

Features
Gene ID: ENSG00000177842
  
Biological name :ZNF620
  
Synonyms : Q6ZNG0 / zinc finger protein 620 / ZNF620
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p22.1
Gene start: 40505992
Gene end: 40518736
  
Corresponding Affymetrix probe sets: 1558743_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000406156
Ensembl peptide - ENSP00000406967
Ensembl peptide - ENSP00000322265
Ensembl peptide - ENSP00000391472
NCBI entrez gene - 253639     See in Manteia.
RefSeq - XM_017006069
RefSeq - NM_175888
RefSeq - XM_005265011
RefSeq - XM_005265012
RefSeq - XM_017006064
RefSeq - XM_017006065
RefSeq - XM_017006066
RefSeq - XM_017006067
RefSeq - NM_001256167
RefSeq - NM_001256168
RefSeq Peptide - NP_787084
RefSeq Peptide - NP_001243096
RefSeq Peptide - NP_001243097
swissprot - A0A024R2M2
swissprot - Q6ZNG0
swissprot - F8WC31
swissprot - C9J967
Ensembl - ENSG00000177842
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8N2I2 / ZNF619 / zinc finger protein 619ENSG0000017787355
Q6ZSS3 / ZNF621 / zinc finger protein 621ENSG0000017288851
Q6ZS27 / ZNF662 / zinc finger protein 662ENSG0000018298346


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr