ENSG00000174740


Homo sapiens

Features
Gene ID: ENSG00000174740
  
Biological name :PABPC5
  
Synonyms : PABPC5 / poly(A) binding protein cytoplasmic 5 / Q96DU9
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: 1
Band: q21.31
Gene start: 91434595
Gene end: 91438584
  
Corresponding Affymetrix probe sets: 233136_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000308012
Ensembl peptide - ENSP00000362197
NCBI entrez gene - 140886     See in Manteia.
OMIM - 300407
RefSeq - NM_080832
RefSeq Peptide - NP_543022
swissprot - Q5JQF3
swissprot - Q96DU9
Ensembl - ENSG00000174740
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Pabpc5ENSMUSG00000034732Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PABPC4 / Q13310 / poly(A) binding protein cytoplasmic 4ENSG0000009062164
P11940 / PABPC1 / poly(A) binding protein cytoplasmic 1ENSG0000007075663
PABPC3 / Q9H361 / poly(A) binding protein cytoplasmic 3ENSG0000015184660
P0CB38 / PABPC4L / poly(A) binding protein cytoplasmic 4 likeENSG0000025453559
Q4VXU2 / PABPC1L / poly(A) binding protein cytoplasmic 1 likeENSG0000010110457
Q5JQF8 / PABPC1L2B / poly(A) binding protein cytoplasmic 1 like 2BENSG0000018438830
Q5JQF8 / PABPC1L2A / poly(A) binding protein cytoplasmic 1 like 2AENSG0000018628830
RBMS2 / Q15434 / RNA binding motif single stranded interacting protein 2ENSG0000007606714
ELAVL2 / Q12926 / ELAV like RNA binding protein 2ENSG0000010710514
RBMS3 / Q6XE24 / RNA binding motif single stranded interacting protein 3ENSG0000014464214
PUF60 / Q9UHX1 / poly(U) binding splicing factor 60ENSG0000017995014
ELAVL1 / Q15717 / ELAV like RNA binding protein 1ENSG0000006604413
RBMS1 / P29558 / RNA binding motif single stranded interacting protein 1ENSG0000015325013
ELAVL4 / P26378 / ELAV like RNA binding protein 4ENSG0000016237413
ELAVL3 / Q14576 / ELAV like RNA binding protein 3ENSG0000019636113


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR003954  RNA recognition motif domain, eukaryote
 IPR006515  Polyadenylate binding protein, human types 1, 2, 3, 4
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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