ENSG00000176225


Homo sapiens

Features
Gene ID: ENSG00000176225
  
Biological name :RTTN
  
Synonyms : Q86VV8 / rotatin / RTTN
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 18
Strand: -1
Band: q22.2
Gene start: 70003031
Gene end: 70205945
  
Corresponding Affymetrix probe sets: 1553277_at (Human Genome U133 Plus 2.0 Array)   1557388_at (Human Genome U133 Plus 2.0 Array)   227072_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000491507
Ensembl peptide - ENSP00000462926
Ensembl peptide - ENSP00000491518
Ensembl peptide - ENSP00000492460
Ensembl peptide - ENSP00000492443
Ensembl peptide - ENSP00000492180
Ensembl peptide - ENSP00000491968
Ensembl peptide - ENSP00000491654
Ensembl peptide - ENSP00000255674
Ensembl peptide - ENSP00000462675
Ensembl peptide - ENSP00000462733
NCBI entrez gene - 25914     See in Manteia.
OMIM - 610436
RefSeq - XM_017025696
RefSeq - XM_006722434
RefSeq - XM_006722435
RefSeq - XM_011525902
RefSeq - XM_011525903
RefSeq - XM_011525904
RefSeq - XM_011525905
RefSeq - XM_011525906
RefSeq - XM_011525907
RefSeq - XM_011525908
RefSeq - XM_017025693
RefSeq - XM_017025694
RefSeq - XM_017025695
RefSeq - NM_001318520
RefSeq - NM_173630
RefSeq Peptide - NP_001305449
RefSeq Peptide - NP_775901
swissprot - A0A1W2PR21
swissprot - A0A1W2PQI7
swissprot - A0A1W2PPP7
swissprot - J3KSV7
swissprot - A0A1W2PR96
swissprot - J3KTD2
swissprot - Q86VV8
swissprot - A0A1W2PPP3
swissprot - J3KT00
swissprot - A0A1W2PR32
Ensembl - ENSG00000176225
  
Related genetic diseases (OMIM): 614833 - Microcephaly, short stature, and polymicrogyria with seizures, 614833
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rttnENSDARG00000004131Danio rerio
 RTTNENSGALG00000013745Gallus gallus
 RttnENSMUSG00000023066Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR029249  Rotatin, N-terminal
 IPR030791  Rotatin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007368 determination of left/right symmetry IEA
 biological_processGO:0044782 cilium organization IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0036064 ciliary basal body IEA
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0005488 binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001272 Cerebellar atrophy 
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 HP:0001273 Abnormality of the corpus callosum "Abnormality of the corpus callosum, which is a broad thick band of nerve fibers that connects the right and left cerebral hemispheres." [HPO:curators]
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 HP:0002126 Polymicrogyria "A congenital abnormality of the cerebral hemisphere characterized by an excessive number of small gyri (convolutions) on the surface of the brain." [HPO:curators]
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 HP:0002342 Mental retardation, moderate "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 35-49." [HPO:curators]
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 HP:0002353 EEG abnormalities "Abnormality observed by electroencephalogram (EEG), which is used to record of the brain s spontaneous electrical activity from multiple electrodes placed on the scalp." [HPO:curators]
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 HP:0002465 Poor speech 
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 HP:0003502 Mild short stature "A mild degree of short stature." [HPO:curators]
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 HP:0007256 Mild pyramidal signs 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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