ENSG00000179119


Homo sapiens

Features
Gene ID: ENSG00000179119
  
Biological name :SPTY2D1
  
Synonyms : Q68D10 / SPT2 chromatin protein domain containing 1 / SPTY2D1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: p15.1
Gene start: 18606401
Gene end: 18634791
  
Corresponding Affymetrix probe sets: 229594_at (Human Genome U133 Plus 2.0 Array)   235440_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000337991
NCBI entrez gene - 144108     See in Manteia.
RefSeq - NM_194285
RefSeq - XM_011519919
RefSeq Peptide - NP_919261
swissprot - Q68D10
Ensembl - ENSG00000179119
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 spty2d1ENSDARG00000033889Danio rerio
 E1BUG7ENSGALG00000006355Gallus gallus
 Q68FG3ENSMUSG00000049516Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013256  Chromatin SPT2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006334 nucleosome assembly IMP
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IMP
 biological_processGO:0010847 regulation of chromatin assembly IMP
 biological_processGO:0043486 histone exchange IMP
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus ISS
 molecular_functionGO:0001042 RNA polymerase I core binding ISS
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0042393 histone binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr