ENSG00000180098


Homo sapiens

Features
Gene ID: ENSG00000180098
  
Biological name :TRNAU1AP
  
Synonyms : Q9NX07 / tRNA selenocysteine 1 associated protein 1 / TRNAU1AP
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p35.3
Gene start: 28553085
Gene end: 28578545
  
Corresponding Affymetrix probe sets: 218977_s_at (Human Genome U133 Plus 2.0 Array)   222800_at (Human Genome U133 Plus 2.0 Array)   223965_at (Human Genome U133 Plus 2.0 Array)   228997_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000362936
NCBI entrez gene - 54952     See in Manteia.
RefSeq - NM_017846
RefSeq - XM_017001542
RefSeq Peptide - NP_060316
swissprot - Q9NX07
Ensembl - ENSG00000180098
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q503H1ENSDARG00000101323Danio rerio
 ENSGALG00000001310Gallus gallus
 Q80VC6ENSMUSG00000028898Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5T4I8 / C6orf52 / chromosome 6 open reading frame 52ENSG0000013743416


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034510  SECp43, RNA recognition motif 2
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001514 selenocysteine incorporation IEA
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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