ENSG00000182095


Homo sapiens

Features
Gene ID: ENSG00000182095
  
Biological name :TNRC18
  
Synonyms : O15417 / TNRC18 / trinucleotide repeat containing 18
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: -1
Band: p22.1
Gene start: 5306790
Gene end: 5425414
  
Corresponding Affymetrix probe sets: 1558238_at (Human Genome U133 Plus 2.0 Array)   1558949_at (Human Genome U133 Plus 2.0 Array)   1562896_at (Human Genome U133 Plus 2.0 Array)   226691_at (Human Genome U133 Plus 2.0 Array)   229257_at (Human Genome U133 Plus 2.0 Array)   235755_at (Human Genome U133 Plus 2.0 Array)   242187_s_at (Human Genome U133 Plus 2.0 Array)   244882_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000398809
Ensembl peptide - ENSP00000410856
Ensembl peptide - ENSP00000413911
Ensembl peptide - ENSP00000329902
Ensembl peptide - ENSP00000382364
Ensembl peptide - ENSP00000382452
Ensembl peptide - ENSP00000395538
Ensembl peptide - ENSP00000395990
NCBI entrez gene - 84629     See in Manteia.
RefSeq - XM_017012739
RefSeq - XM_017012730
RefSeq - XM_017012731
RefSeq - XM_017012732
RefSeq - XM_017012733
RefSeq - XM_017012734
RefSeq - XM_017012735
RefSeq - XM_017012736
RefSeq - XM_017012737
RefSeq - XM_017012738
RefSeq - NM_001080495
RefSeq - XM_017012728
RefSeq - XM_017012729
RefSeq Peptide - NP_001073964
swissprot - H7BXS9
swissprot - H7C0N9
swissprot - H7C177
swissprot - H7C3U5
swissprot - H9KVB4
swissprot - A8MTZ4
swissprot - C9J9K1
swissprot - O15417
Ensembl - ENSG00000182095
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tnrc18ENSDARG00000077052Danio rerio
 TNRC18ENSGALG00000040770Gallus gallus
 Tnrc18ENSMUSG00000039477Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BAHCC1 / BAH domain and coiled-coil containing 1ENSG0000026607429


Protein motifs (from Interpro)
Interpro ID Name
 IPR001025  Bromo adjacent homology (BAH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006342 chromatin silencing IBA
 biological_processGO:0031507 heterochromatin assembly IBA
 cellular_componentGO:0000785 chromatin IBA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005677 chromatin silencing complex IBA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0031965 nuclear membrane IDA
 molecular_functionGO:0000976 transcription regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003682 chromatin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr