ENSG00000188060


Homo sapiens

Features
Gene ID: ENSG00000188060
  
Biological name :RAB42
  
Synonyms : Q8N4Z0 / RAB42 / RAB42, member RAS oncogene family
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p35.3
Gene start: 28592200
Gene end: 28595443
  
Corresponding Affymetrix probe sets: 1552846_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000362932
Ensembl peptide - ENSP00000491546
NCBI entrez gene - 115273     See in Manteia.
RefSeq - XM_017000226
RefSeq - NM_001193532
RefSeq - NM_152304
RefSeq Peptide - NP_689517
RefSeq Peptide - NP_001180461
swissprot - Q8N4Z0
Ensembl - ENSG00000188060
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CU571310.1ENSDARG00000102580Danio rerio
 ENSGALG00000000994Gallus gallus
 Rab42ENSMUSG00000089687Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q96DA2 / RAB39B / RAB39B, member RAS oncogene familyENSG0000015596136
Q14964 / RAB39A / RAB39A, member RAS oncogene familyENSG0000017933136
RAB2A / P61019 / RAB2A, member RAS oncogene familyENSG0000010438832
RAB2B / Q8WUD1 / RAB2B, member RAS oncogene familyENSG0000012947232
RAB14 / P61106 / RAB14, member RAS oncogene familyENSG0000011939629
RAB4B / P61018 / RAB4B, member RAS oncogene familyENSG0000016757827
RAB4B-EGLN2 / RAB4B-EGLN2 readthrough (NMD candidate)ENSG0000017157027
P62491 / RAB11A / RAB11A, member RAS oncogene familyENSG0000010376926
RAB25 / P57735 / RAB25, member RAS oncogene familyENSG0000013269826
RAB4A / P20338 / RAB4A, member RAS oncogene familyENSG0000016811825
Q15907 / RAB11B / RAB11B, member RAS oncogene familyENSG0000018523624
RAB18 / Q9NP72 / RAB18, member RAS oncogene familyENSG0000009924623


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
RAB geranylgeranylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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