ENSG00000198380


Homo sapiens

Features
Gene ID: ENSG00000198380
  
Biological name :GFPT1
  
Synonyms : GFPT1 / glutamine--fructose-6-phosphate transaminase 1 / Q06210
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: p13.3
Gene start: 69319769
Gene end: 69387254
  
Corresponding Affymetrix probe sets: 202721_s_at (Human Genome U133 Plus 2.0 Array)   202722_s_at (Human Genome U133 Plus 2.0 Array)   226886_at (Human Genome U133 Plus 2.0 Array)   227027_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000349860
Ensembl peptide - ENSP00000354347
NCBI entrez gene - 2673     See in Manteia.
OMIM - 138292
RefSeq - XM_017003802
RefSeq - NM_001244710
RefSeq - NM_002056
RefSeq - XM_017003801
RefSeq Peptide - NP_001231639
RefSeq Peptide - NP_002047
swissprot - Q06210
Ensembl - ENSG00000198380
  
Related genetic diseases (OMIM): 610542 - Myasthenia, congenital, 12, with tubular aggregates, 610542
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gfpt1ENSDARG00000057465Danio rerio
 GFPT1ENSGALG00000036391Gallus gallus
 Gfpt1ENSMUSG00000029992Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GFPT2 / O94808 / glutamine-fructose-6-phosphate transaminase 2ENSG0000013145977


Protein motifs (from Interpro)
Interpro ID Name
 IPR001347  Sugar isomerase (SIS)
 IPR005855  Glucosamine-fructose-6-phosphate aminotransferase, isomerising
 IPR017932  Glutamine amidotransferase type 2 domain
 IPR029055  Nucleophile aminohydrolases, N-terminal
 IPR035466  GlmS/AgaS, SIS domain 1
 IPR035490  GlmS/FrlB, SIS domain 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006002 fructose 6-phosphate metabolic process TAS
 biological_processGO:0006047 UDP-N-acetylglucosamine metabolic process IBA
 biological_processGO:0006048 UDP-N-acetylglucosamine biosynthetic process TAS
 biological_processGO:0006112 energy reserve metabolic process TAS
 biological_processGO:0006487 protein N-linked glycosylation IBA
 biological_processGO:0006541 glutamine metabolic process IEA
 biological_processGO:0032922 circadian regulation of gene expression IEA
 biological_processGO:0036498 IRE1-mediated unfolded protein response TAS
 biological_processGO:0048511 rhythmic process IEA
 biological_processGO:1901135 carbohydrate derivative metabolic process IEA
 biological_processGO:1901137 carbohydrate derivative biosynthetic process IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0004360 glutamine-fructose-6-phosphate transaminase (isomerizing) activity TAS
 molecular_functionGO:0008483 transaminase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0097367 carbohydrate derivative binding IEA


Pathways (from Reactome)
Pathway description
XBP1(S) activates chaperone genes
Defective GFPT1 causes CMSTA1
Synthesis of UDP-N-acetyl-glucosamine


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000276 Long face 
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 HP:0000303 Mandibular prognathia "Abnormal prominence of the chin related to an abnormally long mandible." [HPO:curators]
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 HP:0000467 Neck muscle weakness 
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000597 Ophthalmoparesis "Ophthalmoplegia is a paralysis or weakness of one or more of the muscles that control eye movement." [HPO:curators]
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 HP:0000689 Dental malocclusion "Dental malocclusion refers to an abnormality of the occlusion, or alignment, of the teeth and the way the upper and lower teeth fit together, resulting in overcrowding of teeth or in abnormal bite patterns." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001270 Motor retardation 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001558 Decreased fetal movement "An abnormal reduction in quantity or strength of fetal movements." [HPO:curators]
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 HP:0001612 Weak cry 
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002515 Waddling gait 
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 HP:0002715 Immunological abnormality 
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 HP:0002747 Respiratory insufficiency due to muscle weakness 
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 HP:0002804 Arthrogryposis multiplex congenita 
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 HP:0003199 Decreased muscle mass 
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0003388 Easy fatigability 
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 HP:0003391 Gower sign "A phenomen whereby patients are not able to stand up without the use of the hands owing to weakness of the proximal muscles of the lower limbs." [HPO:probinson]
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 HP:0003394 Muscle cramps 
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 HP:0003403 EMG shows decremental response of compound muscle action potential (CMAP) to repetitive nerve stimulation 
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 HP:0003443 Muscle biopsy shows decreased size of nerve terminals 
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 HP:0003473 Mild-moderate fatigable weakness of limb muscles 
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 HP:0003554 Type 2 muscle fiber atrophy "Atrophy (wasting) affecting primary type 2 muscle fibers. This feature in general can only be observed on muscle biopsy." [HPO:curators]
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 HP:0003593 Early onset 
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 HP:0003621 Juvenile onset 
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 HP:0003680 Nonprogressive disorder 
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 HP:0003828 Variable expressivity 
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 HP:0007126 Proximal amyotrophy "Amyotrophy (muscular atrophy) affecting the proximal musculature." [HPO:curators]
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 HP:0008180 Mildly elevated creatine phosphokinase 
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 HP:0010628 Facial muscle weakness "A weakness of any or all of the muscles of the face of any etiology." [HPO:curators]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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