ENSGALG00000000908


Gallus gallus

Features
Gene ID: ENSGALG00000000908
  
Biological name :ADAT1
  
Synonyms : ADAT1 / tRNA-specific adenosine deaminase 1
  
Possible biological names infered from orthology : adenosine deaminase, tRNA specific 1 / Mus musculus adenosine deaminase, tRNA-specific 1 (Adat1), transcript variant 3, mRNA. / Q9BUB4 / Q9JHI2
  
Species: Gallus gallus
  
Chr. number: 11
Strand: 1
Band:
Gene start: 20121097
Gene end: 20141797
  
Corresponding Affymetrix probe sets: GgaAffx.13071.1.S1_at (Chicken Array)   GgaAffx.21002.1.S1_s_at (Chicken Array)   GgaAffx.594.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000001334
NCBI entrez gene - 415886     See in Manteia.
RefSeq - XM_015292611
RefSeq - NM_001012779
RefSeq - XM_015292609
RefSeq - XM_015292610
RefSeq - XM_015292606
RefSeq - XM_015292607
RefSeq - XM_015292608
RefSeq Peptide - NP_001012797
swissprot - F1NE71
Ensembl - ENSGALG00000000908
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 adat1ENSDARG00000061348Danio rerio
 ADAT1ENSG00000065457Homo sapiens
 Adat1ENSMUSG00000031949Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ADARB1 / adenosine deaminase, RNA specific B1 / P78563* / Q91ZS8* / Double-stranded RNA-specific editase 1 *ENSGALG0000000752722
ADAR / adenosine deaminase, RNA specific / P55265* / Q99MU3* / Mus musculus adenosine deaminase, RNA-specific (Adar), transcript variant 4, mRNA.*ENSGALG0000002147521
ADAD1 / adenosine deaminase domain containing 1 / Q5SUE7* / Q96M93* / Adenosine deaminase domain-containing protein 1 *ENSGALG0000004499520
ADARB2 / adenosine deaminase, RNA specific B2 (inactive) / Q9JI20* / Q9NS39* / adenosine deaminase, RNA-specific, B2*ENSGALG0000000679711


Protein motifs (from Interpro)
Interpro ID Name
 IPR002466  Adenosine deaminase/editase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0008033 tRNA processing IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004000 adenosine deaminase activity IEA
 molecular_functionGO:0008251 tRNA-specific adenosine deaminase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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