ENSGALG00000001377


Gallus gallus

Features
Gene ID: ENSGALG00000001377
  
Biological name :POLRMT
  
Synonyms : POLRMT / RNA polymerase mitochondrial
  
Possible biological names infered from orthology : O00411 / polymerase (RNA) mitochondrial (DNA directed) / Q8BKF1
  
Species: Gallus gallus
  
Chr. number: 28
Strand: -1
Band:
Gene start: 2724945
Gene end: 2739524
  
Corresponding Affymetrix probe sets: Gga.17643.1.S1_s_at (Chicken Array)   Gga.17643.2.S1_at (Chicken Array)   GgaAffx.24026.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000002096
Ensembl peptide - ENSGALP00000056978
NCBI entrez gene - 420084     See in Manteia.
RefSeq - XM_004948824
RefSeq - XM_015300004
RefSeq - XM_418204
swissprot - E1BZ13
swissprot - A0A1D5PVK6
Ensembl - ENSGALG00000001377
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 polrmtENSDARG00000101220Danio rerio
 O00411ENSG00000099821Homo sapiens
 PolrmtENSMUSG00000020329Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002092  DNA-directed RNA polymerase, phage-type
 IPR002885  Pentatricopeptide repeat
 IPR024075  DNA-directed RNA polymerase, helix hairpin domain superfamily
 IPR029262  DNA-directed RNA polymerase, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006390 mitochondrial transcription IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0034245 mitochondrial DNA-directed RNA polymerase complex IBA
 cellular_componentGO:0042645 mitochondrial nucleoid IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003899 DNA-directed 5"-3" RNA polymerase activity IBA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016779 nucleotidyltransferase activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
Mitochondrial transcription initiation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr