ENSGALG00000001525


Gallus gallus

Features
Gene ID: ENSGALG00000001525
  
Biological name :CALCOCO2
  
Synonyms : calcium binding and coiled-coil domain 2 / CALCOCO2
  
Possible biological names infered from orthology : A2A6M5 / Calcium-binding and coiled-coil domain-containing protein 2 / Q13137
  
Species: Gallus gallus
  
Chr. number: 27
Strand: 1
Band:
Gene start: 3710068
Gene end: 3718422
  
Corresponding Affymetrix probe sets: Gga.4706.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000002315
NCBI entrez gene - 419993     See in Manteia.
RefSeq - XM_015299447
RefSeq - XM_418115
swissprot - E1BRX6
Ensembl - ENSGALG00000001525
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 calcoco2ENSDARG00000052515Danio rerio
 Q13137ENSG00000136436Homo sapiens
 A2A6M5ENSMUSG00000006056Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TAX1BP1 / Tax1 binding protein 1 / Q3UKC1* / Q86VP1* / Tax1-binding *ENSGALG0000004282232


Protein motifs (from Interpro)
Interpro ID Name
 IPR012852  Calcium binding and coiled-coil domain-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0034341 response to interferon-gamma IEA
 biological_processGO:0098792 xenophagy IEA
 biological_processGO:1901098 positive regulation of autophagosome maturation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005776 autophagosome IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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