ENSMUSG00000006056


Mus musculus

Features
Gene ID: ENSMUSG00000006056
  
Biological name :Calcoco2
  
Synonyms : A2A6M5 / Calcium-binding and coiled-coil domain-containing protein 2 / Calcoco2
  
Possible biological names infered from orthology : calcium binding and coiled-coil domain 2 / Q13137
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: D
Gene start: 96099326
Gene end: 96111964
  
Corresponding Affymetrix probe sets: 10390246 (MoGene1.0st)   10488264 (MoGene1.0st)   1429483_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000087407
Ensembl peptide - ENSMUSP00000103309
NCBI entrez gene - 76815     See in Manteia.
MGI - MGI:1343177
RefSeq - XM_006534460
RefSeq - NM_001271018
RefSeq Peptide - NP_001257947
swissprot - A2A6M5
swissprot - G8JL78
Ensembl - ENSMUSG00000006056
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 calcoco2ENSDARG00000052515Danio rerio
 CALCOCO2ENSGALG00000001525Gallus gallus
 Q13137ENSG00000136436Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q3UKC1 / Tax1bp1 / Tax1-binding / Q86VP1* / Tax1 binding protein 1*ENSMUSG0000000453530
Q8CGU1 / Calcoco1 / Calcium-binding and coiled-coil domain-containing protein 1 / Q9P1Z2* / calcium binding and coiled-coil domain 1*ENSMUSG0000002305525


Protein motifs (from Interpro)
Interpro ID Name
 IPR012852  Calcium binding and coiled-coil domain-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0098792 xenophagy ISS
 biological_processGO:1901098 positive regulation of autophagosome maturation ISS
 cellular_componentGO:0000421 autophagosome membrane IEA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005776 autophagosome ISS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016605 PML body ISO
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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