ENSGALG00000001563


Gallus gallus
wdWDR45Bdomainautophagyproteinphagophoreassemblysitemembranephosphatidylinositol-bindingrepeatyvtnrepeat-like-containingsuperfamily-repeat-containingmitochondrionlipidationlocalizationnucleuscytosolextrinsiccomponent-phosphate-bisphosphatemacroautophagy

Features
Gene ID: ENSGALG00000001563
  
Biological name :WDR45B
  
Synonyms : Q5ZL16 / WDR45B / WD repeat domain phosphoinositide-interacting protein 3
  
Possible biological names infered from orthology : Q5MNZ6 / Q9CR39 / WD repeat domain 45B
  
Species: Gallus gallus
  
Chr. number: 18
Strand: 1
Band:
Gene start: 3428801
Gene end: 3443839
  
Corresponding Affymetrix probe sets: Gga.11558.1.S1_at (Chicken Array)   Gga.17115.1.S1_s_at (Chicken Array)   Gga.7381.1.S1_at (Chicken Array)   Gga.7381.2.S1_s_at (Chicken Array)   Gga.7381.3.S1_s_at (Chicken Array)   GgaAffx.12021.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055017
Ensembl peptide - ENSGALP00000002372
NCBI entrez gene - 417339     See in Manteia.
RefSeq - XM_015295142
RefSeq - NM_001007844
RefSeq - XM_015295140
RefSeq Peptide - NP_001007845
swissprot - Q5ZL16
swissprot - A0A1D5PQ56
Ensembl - ENSGALG00000001563
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 wdr45bENSDARG00000021557Danio rerio
 Q5MNZ6ENSG00000141580Homo sapiens
 Q9CR39ENSMUSG00000025173Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain


Gene Ontology (GO)
catabolic processcellular component organizationcellular metabolic processprocess utilizing autophagic mechanismnitrogen compound metabolic processbiosynthetic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular component biogenesiscellular localizationcatabolic processcellular component organizationcellular metabolic processprocess utilizing autophagic mechanismnitrogen compound metabolic processbiosynthetic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular component biogenesiscellular localizationcatabolic processcellular component organizationcellular metabolic processprocess utilizing autophagic mechanismnitrogen compound metabolic processbiosynthetic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular component biogenesiscellular localizationcatabolic processcellular component organizationcellular metabolic processprocess utilizing autophagic mechanismnitrogen compound metabolic processbiosynthetic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular component biogenesiscellular localizationcatabolic processcellular component organizationcellular metabolic processprocess utilizing autophagic mechanismnitrogen compound metabolic processbiosynthetic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular component biogenesiscellular localizationcatabolic processcellular component organizationcellular metabolic processprocess utilizing autophagic mechanismnitrogen compound metabolic processbiosynthetic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular component biogenesiscellular localizationcatabolic processcellular component organizationcellular metabolic processprocess utilizing autophagic mechanismnitrogen compound metabolic processbiosynthetic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular component biogenesiscellular localizationcatabolic processcellular component organizationcellular metabolic processprocess utilizing autophagic mechanismnitrogen compound metabolic processbiosynthetic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular component biogenesiscellular localizationcatabolic processcellular component organizationcellular metabolic processprocess utilizing autophagic mechanismnitrogen compound metabolic processbiosynthetic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular component biogenesiscellular localizationcatabolic processcellular component organizationcellular metabolic processprocess utilizing autophagic mechanismnitrogen compound metabolic processbiosynthetic processprimary metabolic processorganic substance metabolic processmacromolecule localizationcellular component biogenesiscellular localizationcatabolic prcatabolic processcellular comcellular component organizationcellular metcellular metabolic processprocess utilprocess utilizing autophagic mechanismnitrogen comnitrogen compound metabolic processbiosyntheticbiosynthetic processprimary metaprimary metabolic processorganic subsorganic substance metabolic processmacromoleculmacromolecule localizationcellular comcellular component biogenesiscellular loccellular localization
lipid bindingion bindinglipid bindingion bindinglipid bindingion bindinglipid bindingion bindinglipid bindingion bindinglipid bindingion bindinglipid bindingion bindinglipid bindingion bindinglipid bindingion bindinglipid bindingion bindinglipid bindinglipid bindingion bindingion binding
cellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellcellmembranemembrane
TypeGO IDTermEv.Code
 biological_processGO:0000422 autophagy of mitochondrion IBA
 biological_processGO:0006497 protein lipidation IBA
 biological_processGO:0034497 protein localization to phagophore assembly site IBA
 biological_processGO:0044804 autophagy of nucleus IBA
 cellular_componentGO:0005829 cytosol IBA
 cellular_componentGO:0019898 extrinsic component of membrane IBA
 cellular_componentGO:0034045 phagophore assembly site membrane IBA
 molecular_functionGO:0032266 phosphatidylinositol-3-phosphate binding IBA
 molecular_functionGO:0080025 phosphatidylinositol-3,5-bisphosphate binding IBA


Pathways (from Reactome)
Pathway description
Macroautophagy


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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