ENSGALG00000001869


Gallus gallus

Features
Gene ID: ENSGALG00000001869
  
Biological name :LINGO2
  
Synonyms : leucine rich repeat and Ig domain containing 2 / LINGO2
  
Possible biological names infered from orthology : Q3URE9 / Q7L985
  
Species: Gallus gallus
  
Chr. number: Z
Strand: -1
Band:
Gene start: 68842898
Gene end: 68844718
  
Corresponding Affymetrix probe sets: GgaAffx.1225.1.A1_at (Chicken Array)   GgaAffx.1225.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000002898
NCBI entrez gene - 431646     See in Manteia.
RefSeq - XM_004949600
RefSeq - XM_015280707
RefSeq - XM_015280708
swissprot - F1NFK3
Ensembl - ENSGALG00000001869
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lingo2aENSDARG00000074535Danio rerio
 lingo2bENSDARG00000069970Danio rerio
 LINGO2ENSG00000174482Homo sapiens
 Lingo2ENSMUSG00000045083Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LINGO3 / leucine rich repeat and Ig domain containing 3 / P0C6S8* / Q6GQU6* / Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3 *ENSGALG0000000080661
LINGO1 / Q50L44 / Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 / Q9D1T0* / Q96FE5* / leucine rich repeat and Ig domain containing 1*ENSGALG0000000270861
LRRC4C / leucine rich repeat containing 4C / Q8C031* / Q9HCJ2* / Leucine-rich repeat-containing protein 4C *ENSGALG0000000794827
LRRN1 / leucine rich repeat neuronal 1 / Q61809* / Q6UXK5* / Leucine-rich repeat neuronal protein 1 *ENSGALG0000003509926
LRRN3 / leucine rich repeat neuronal 3 / Q8CBC6* / Q9H3W5* / Leucine-rich repeat neuronal protein 3 *ENSGALG0000000948825
LRRN2 / leucine rich repeat neuronal 2 / O75325* / leucine rich repeat protein 2, neuronal*ENSGALG0000000063924
LRFN5 / leucine rich repeat and fibronectin type III domain containing 5 / Q8BXA0* / Q96NI6* / Leucine-rich repeat and fibronectin type-III domain-containing protein 5 *ENSGALG0000001250524
LRFN2 / leucine rich repeat and fibronectin type III domain containing 2 / Q80TG9* / Q9ULH4* / Leucine-rich repeat and fibronectin type-III domain-containing protein 2 *ENSGALG0000001005021


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051965 positive regulation of synapse assembly IEA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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