ENSGALG00000001916


Gallus gallus

Features
Gene ID: ENSGALG00000001916
  
Biological name :SLIT3
  
Synonyms : SLIT3 / slit guidance ligand 3
  
Possible biological names infered from orthology : O75094 / Q9WVB4 / Slit homolog 3 protein
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 4204850
Gene end: 4675881
  
Corresponding Affymetrix probe sets: Gga.2000.1.S1_at (Chicken Array)   GgaAffx.20384.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000002963
NCBI entrez gene - 374173     See in Manteia.
RefSeq - XM_015293586
RefSeq - NM_001197042
RefSeq - XM_015293584
RefSeq - XM_015293585
RefSeq - XM_015293582
RefSeq - XM_015293583
RefSeq Peptide - NP_001183971
swissprot - F1NF14
Ensembl - ENSGALG00000001916
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slit3ENSDARG00000034268Danio rerio
 SLIT3ENSG00000184347Homo sapiens
 Slit3ENSMUSG00000056427Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SLIT2 / slit homolog 2 protein precursor / O94813* / Q9R1B9* / slit guidance ligand 2*ENSGALG0000004112167
SLIT1 / slit homolog 1 protein precursor / Q80TR4* / O75093* / slit guidance ligand 1* / Slit homolog 1 protein *ENSGALG0000004287159
CRB2 / crumbs 2, cell polarity complex component / 2 * / Q5IJ48* / Q80YA8*ENSGALG0000000116914
DNER / delta/notch like EGF repeat containing / Q8JZM4* / Q8NFT8* / Delta and Notch-like epidermal growth factor-related receptor *ENSGALG0000000295810
CRB1 / crumbs 1, cell polarity complex component / 1 * / P82279* / Q8VHS2*ENSGALG000000022877
DLK2 / delta like non-canonical Notch ligand 2 / 2 * / Q6UY11* / Q8K1E3*ENSGALG000000103866
DLK1 / delta like non-canonical Notch ligand 1 / P80370*ENSGALG000000112446


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR000742  EGF-like domain
 IPR001611  Leucine-rich repeat
 IPR001791  Laminin G domain
 IPR001881  EGF-like calcium-binding domain
 IPR003591  Leucine-rich repeat, typical subtype
 IPR006207  Cystine knot, C-terminal
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR013032  EGF-like, conserved site
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR018097  EGF-like calcium-binding, conserved site
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007409 axonogenesis IBA
 biological_processGO:0007411 axon guidance IEA
 biological_processGO:0008285 negative regulation of cell proliferation IEA
 biological_processGO:0009887 animal organ morphogenesis IEA
 biological_processGO:0010629 negative regulation of gene expression IEA
 biological_processGO:0030308 negative regulation of cell growth IEA
 biological_processGO:0032870 cellular response to hormone stimulus IEA
 biological_processGO:0035385 Roundabout signaling pathway IEA
 biological_processGO:0048846 axon extension involved in axon guidance IEA
 biological_processGO:0050919 negative chemotaxis IEA
 biological_processGO:0051414 response to cortisol IEA
 biological_processGO:0061364 apoptotic process involved in luteolysis IEA
 biological_processGO:0070100 negative regulation of chemokine-mediated signaling pathway IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005623 cell IDA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0048495 Roundabout binding IEA


Pathways (from Reactome)
Pathway description
Signaling by ROBO receptors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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