ENSGALG00000002021


Gallus gallus

Features
Gene ID: ENSGALG00000002021
  
Biological name :ZC3H12A
  
Synonyms : ZC3H12A / zinc finger CCCH-type containing 12A
  
Possible biological names infered from orthology : Q5D1E7 / Q5D1E8
  
Species: Gallus gallus
  
Chr. number: 23
Strand: -1
Band:
Gene start: 3785583
Gene end: 3791308
  
Corresponding Affymetrix probe sets: GgaAffx.1342.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003140
Ensembl peptide - ENSGALP00000047285
swissprot - E1BTA2
Ensembl - ENSGALG00000002021
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkey-206d17.12ENSDARG00000101034Danio rerio
 zc3h12aENSDARG00000005271Danio rerio
 Q5D1E8ENSG00000163874Homo sapiens
 Q5D1E7ENSMUSG00000042677Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ZC3H12B / zinc finger CCCH-type containing 12B / Q5HYM0*ENSGALG0000003939132
ZC3H12C / zinc finger CCCH-type containing 12C / Q5DTV4* / Q9C0D7*ENSGALG0000001715431
ZC3H12D / zinc finger CCCH-type containing 12D / A2A288*ENSGALG0000003878224
N4BP1 / NEDD4-binding protein 1 / O75113* / Q6A037*ENSGALG0000000390710


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000294 nuclear-transcribed mRNA catabolic process, endonucleolytic cleavage-dependent decay IEA
 biological_processGO:0001933 negative regulation of protein phosphorylation IEA
 biological_processGO:0002230 positive regulation of defense response to virus by host IEA
 biological_processGO:0002757 immune response-activating signal transduction IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0010508 positive regulation of autophagy IEA
 biological_processGO:0010595 positive regulation of endothelial cell migration IEA
 biological_processGO:0010628 positive regulation of gene expression IEA
 biological_processGO:0010629 negative regulation of gene expression IEA
 biological_processGO:0010656 negative regulation of muscle cell apoptotic process IEA
 biological_processGO:0010884 positive regulation of lipid storage IEA
 biological_processGO:0010942 positive regulation of cell death IEA
 biological_processGO:0016579 protein deubiquitination IEA
 biological_processGO:0032088 negative regulation of NF-kappaB transcription factor activity IEA
 biological_processGO:0032715 negative regulation of interleukin-6 production IEA
 biological_processGO:0032720 negative regulation of tumor necrosis factor production IEA
 biological_processGO:0034599 cellular response to oxidative stress IEA
 biological_processGO:0042149 cellular response to glucose starvation IEA
 biological_processGO:0042307 positive regulation of protein import into nucleus IEA
 biological_processGO:0043124 negative regulation of I-kappaB kinase/NF-kappaB signaling IEA
 biological_processGO:0044828 negative regulation by host of viral genome replication IEA
 biological_processGO:0045019 negative regulation of nitric oxide biosynthetic process IEA
 biological_processGO:0045600 positive regulation of fat cell differentiation IEA
 biological_processGO:0045766 positive regulation of angiogenesis IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0050713 negative regulation of interleukin-1 beta secretion IEA
 biological_processGO:0050852 T cell receptor signaling pathway IEA
 biological_processGO:0051259 protein complex oligomerization IEA
 biological_processGO:0055118 negative regulation of cardiac muscle contraction IEA
 biological_processGO:0061014 positive regulation of mRNA catabolic process IEA
 biological_processGO:0061158 3"-UTR-mediated mRNA destabilization IEA
 biological_processGO:0071222 cellular response to lipopolysaccharide IEA
 biological_processGO:0071347 cellular response to interleukin-1 IEA
 biological_processGO:0071356 cellular response to tumor necrosis factor IEA
 biological_processGO:0090501 RNA phosphodiester bond hydrolysis IEA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA
 biological_processGO:0098586 cellular response to virus IEA
 biological_processGO:1900016 negative regulation of cytokine production involved in inflammatory response IEA
 biological_processGO:1900119 positive regulation of execution phase of apoptosis IEA
 biological_processGO:1900165 negative regulation of interleukin-6 secretion IEA
 biological_processGO:1900745 positive regulation of p38MAPK cascade IEA
 biological_processGO:1902714 negative regulation of interferon-gamma secretion IEA
 biological_processGO:1903003 positive regulation of protein deubiquitination IEA
 biological_processGO:1903799 negative regulation of production of miRNAs involved in gene silencing by miRNA IEA
 biological_processGO:1903936 cellular response to sodium arsenite IEA
 biological_processGO:1904468 negative regulation of tumor necrosis factor secretion IEA
 biological_processGO:1904637 cellular response to ionomycin IEA
 biological_processGO:1990869 cellular response to chemokine IEA
 biological_processGO:2000379 positive regulation of reactive oxygen species metabolic process IEA
 biological_processGO:2000627 positive regulation of miRNA catabolic process IEA
 cellular_componentGO:0000932 P-body IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005791 rough endoplasmic reticulum IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0036464 cytoplasmic ribonucleoprotein granule IEA
 cellular_componentGO:0042406 extrinsic component of endoplasmic reticulum membrane IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IEA
 molecular_functionGO:0003730 mRNA 3"-UTR binding IEA
 molecular_functionGO:0004521 endoribonuclease activity IEA
 molecular_functionGO:0004532 exoribonuclease activity IEA
 molecular_functionGO:0004540 ribonuclease activity IEA
 molecular_functionGO:0004843 thiol-dependent ubiquitin-specific protease activity IEA
 molecular_functionGO:0035198 miRNA binding IEA
 molecular_functionGO:0035613 RNA stem-loop binding IEA
 molecular_functionGO:0035925 mRNA 3"-UTR AU-rich region binding IEA
 molecular_functionGO:0043022 ribosome binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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