ENSGALG00000002303


Gallus gallus
repeatsubtypeLRIT1immunoglobulin-likedomainmembranecysteine-richflankingregionc-terminaltypicalfibronectintypeiiii-setfoldsuperfamilyintegralcomponent

Features
Gene ID: ENSGALG00000002303
  
Biological name :LRIT1
  
Synonyms : leucine rich repeat, Ig-like and transmembrane domains 1 / LRIT1
  
Possible biological names infered from orthology : Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1 / Q8K099 / Q9P2V4
  
Species: Gallus gallus
  
Chr. number: 6
Strand: 1
Band:
Gene start: 3009061
Gene end: 3019674
  
Corresponding Affymetrix probe sets: GgaAffx.1542.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003616
NCBI entrez gene - 107053618     See in Manteia.
RefSeq - XM_015288038
swissprot - F1P192
Ensembl - ENSGALG00000002303
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrit1aENSDARG00000019179Danio rerio
 lrit1bENSDARG00000099406Danio rerio
 LRIT1ENSG00000148602Homo sapiens
 Lrit1ENSMUSG00000041044Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LRIT2 / leucine rich repeat, Ig-like and transmembrane domains 2 / A6NDA9* / Q6PFC5* / Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2 *ENSGALG0000000230724
ISLR2 / immunoglobulin superfamily containing leucine-rich repeat protein 2 precursor / ISLR* / Q6UXK2* / O14498* / Q5RKR3* / Q6GU68* / immunoglobulin superfamily containing leucine rich r...ENSGALG0000002915120
LRIT3 / leucine rich repeat, Ig-like and transmembrane domains 3 / Q3SXY7* / W8DXL4* / Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3 *ENSGALG0000002662718
ISLR* / ISLR2* / Q6UXK2* / O14498* / Q5RKR3* / Q6GU68* / immunoglobulin superfamily containing leucine rich repeat* / immunoglobulin superfamily containing leucine rich repeat 2* / Immunogl...ENSGALG0000002152514


Protein motifs (from Interpro)
Interpro ID Name
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013783  Immunoglobulin-like fold
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
membranemembranemembranemembranemembranemembranemembranemembranemembranemembranemembranemembrane
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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