ENSGALG00000003120


Gallus gallus

Features
Gene ID: ENSGALG00000003120
  
Biological name :NCOR2
  
Synonyms : NCOR2 / nuclear receptor corepressor 2
  
Possible biological names infered from orthology : Q9WU42 / Q9Y618
  
Species: Gallus gallus
  
Chr. number: 15
Strand: 1
Band:
Gene start: 4635698
Gene end: 4766293
  
Corresponding Affymetrix probe sets: Gga.7626.1.S1_at (Chicken Array)   GgaAffx.1963.1.S1_at (Chicken Array)   GgaAffx.25755.1.S1_s_at (Chicken Array)   GgaAffx.25755.4.S1_s_at (Chicken Array)   GgaAffx.25755.5.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000004924
NCBI entrez gene - 416815     See in Manteia.
RefSeq - XM_015275620
RefSeq - XM_015275621
swissprot - E1C3T2
Ensembl - ENSGALG00000003120
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ncor2ENSDARG00000000966Danio rerio
 NCOR2ENSG00000196498Homo sapiens
 Ncor2ENSMUSG00000029478Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NCOR1 / nuclear receptor corepressor 1 / O75376* / nuclear receptor co-repressor 1*ENSGALG0000000447742
RCOR1 / REST corepressor 1 / Q8CFE3* / Q9UKL0*ENSGALG000000113844
RCOR3 / REST corepressor 3 / Q6PGA0* / Q9P2K3*ENSGALG000000098713


Protein motifs (from Interpro)
Interpro ID Name
 IPR001005  SANT/Myb domain
 IPR009057  Homeobox-like domain superfamily
 IPR017884  SANT domain
 IPR031557  N-CoR, GPS2-interacting domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0000118 histone deacetylase complex IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003714 transcription corepressor activity IBA
 molecular_functionGO:0008134 transcription factor binding IBA
 molecular_functionGO:0016922 nuclear receptor binding IBA


Pathways (from Reactome)
Pathway description
Downregulation of SMAD2/3:SMAD4 transcriptional activity
Regulation of lipid metabolism by Peroxisome proliferator-activated receptor alpha (PPARalpha)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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