ENSGALG00000003193


Gallus gallus

Features
Gene ID: ENSGALG00000003193
  
Biological name :CRABP-I
  
Synonyms : Cellular retinoic acid-binding protein 1 / CRABP-I / P40220
  
Possible biological names infered from orthology : CRABP1 / P29762 / P62965
  
Species: Gallus gallus
  
Chr. number: 10
Strand: -1
Band:
Gene start: 3636152
Gene end: 3649050
  
Corresponding Affymetrix probe sets: Gga.4546.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000033996
Ensembl peptide - ENSGALP00000060373
Ensembl peptide - ENSGALP00000051820
NCBI entrez gene - 374211     See in Manteia.
RefSeq - NM_001030539
RefSeq Peptide - NP_001025710
swissprot - B0FLN8
swissprot - A0A1L1RNM1
swissprot - A0A1D5PG99
swissprot - P40220
Ensembl - ENSGALG00000003193
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 crabp1aENSDARG00000045926Danio rerio
 crabp1bENSDARG00000035904Danio rerio
 CRABP1ENSG00000166426Homo sapiens
 Crabp1ENSMUSG00000032291Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CRABP2 / cellular retinoic acid binding protein 2 / P22935* / P29373*ENSGALG0000002914074
RBP7 / retinol binding protein 7 / Q96R05* / Q9EPC5* / retinol binding protein 7, cellular*ENSGALG0000000263741
RBP2 / retinol binding protein 2 / P50120* / Q08652* / retinol binding protein 2, cellular*ENSGALG0000000532739
PMP2 / peripheral myelin protein 2 / P02689* / P24526*ENSGALG0000003245339
FABP3 / fatty acid-binding protein, heart / P05413* / P11404* / fatty acid binding protein 3*ENSGALG0000003705039
RBP1 / retinol binding protein 1 / P09455* / Q00915* / retinol binding protein 1, cellular*ENSGALG0000003787539
RBP5 / retinol binding protein 5 / P82980*ENSGALG0000001466236
FABP4 / fatty acid-binding protein, adipocyte / P04117* / P15090* / fatty acid binding protein 4*ENSGALG0000003002535
FABP7 / Q05423 / Fatty acid-binding protein, brain / O15540* / P51880* / fatty acid binding protein 7*ENSGALG0000003893335
FABP5 / fatty acid binding protein 5 / Q01469* / Q05816* / Fatty acid-binding protein, epidermal *ENSGALG0000004134434


Protein motifs (from Interpro)
Interpro ID Name
 IPR000463  Cytosolic fatty-acid binding
 IPR000566  Lipocalin/cytosolic fatty-acid binding domain
 IPR012674  Calycin
 IPR031259  Intracellular lipid binding protein
 IPR031279  Cellular retinoic acid-binding protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0034653 retinoic acid catabolic process IEA
 cellular_componentGO:0005623 cell IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0030424 axon IDA
 cellular_componentGO:0043005 neuron projection IDA
 cellular_componentGO:0070852 cell body fiber IDA
 molecular_functionGO:0001972 retinoic acid binding IEA
 molecular_functionGO:0005501 retinoid binding IDA
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0016918 retinal binding IEA
 molecular_functionGO:0019841 retinol binding IEA


Pathways (from Reactome)
Pathway description
RA biosynthesis pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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