ENSGALG00000003470


Gallus gallus

Features
Gene ID: ENSGALG00000003470
  
Biological name :ZMAT4
  
Synonyms : zinc finger matrin-type 4 / ZMAT4
  
Possible biological names infered from orthology : Q8BZ94 / Q9H898
  
Species: Gallus gallus
  
Chr. number: 22
Strand: -1
Band:
Gene start: 2545784
Gene end: 2565726
  
Corresponding Affymetrix probe sets: GgaAffx.2166.1.S1_at (Chicken Array)   GgaAffx.2166.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005486
NCBI entrez gene - 426786     See in Manteia.
RefSeq - XM_004947605
RefSeq - XM_015297406
swissprot - E1C1I3
Ensembl - ENSGALG00000003470
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zmat4aENSDARG00000092987Danio rerio
 zmat4bENSDARG00000061419Danio rerio
 ZMAT4ENSG00000165061Homo sapiens
 Zmat4ENSMUSG00000037492Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ZNF346 / zinc finger protein 346 / Q9R0B7* / Q9UL40* / Zfp346*ENSGALG0000000114438
KRCC1* / ZMAT1* / Q5H9K5* / Q99JT5* / Q9NPI7* / zinc finger matrin-type 1* / lysine rich coiled-coil 1* / Lysine-rich coiled-coil protein 1 *ENSGALG0000004600933


Protein motifs (from Interpro)
Interpro ID Name
 IPR000690  Matrin/U1-C, C2H2-type zinc finger
 IPR003604  Matrin/U1-C-like, C2H2-type zinc finger
 IPR022755  Zinc finger, double-stranded RNA binding


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0072332 intrinsic apoptotic signaling pathway by p53 class mediator IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0002039 p53 binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr