ENSGALG00000046009


Gallus gallus

Features
Gene ID: ENSGALG00000046009
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : KRCC1 / lysine rich coiled-coil 1 / Lysine-rich coiled-coil protein 1 / Q5H9K5 / Q99JT5 / Q9NPI7 / zinc finger matrin-type 1 / ZMAT1
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 86493517
Gene end: 86506006
  
Corresponding Affymetrix probe sets: GgaAffx.10152.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000061284
NCBI entrez gene - 101748113     See in Manteia.
RefSeq - XM_004936266
RefSeq - XM_015285936
RefSeq - XM_015285937
swissprot - A0A1L1RR46
Ensembl - ENSGALG00000046009
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zgc:114104ENSDARG00000058679Danio rerio
 KRCC1ENSG00000172086Homo sapiens
 ZMAT1ENSG00000166432Homo sapiens
 Krcc1ENSMUSG00000053012Mus musculus
 Zmat1ENSMUSG00000052676Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ZNF346 / zinc finger protein 346 / Q9R0B7* / Q9UL40* / Zfp346*ENSGALG0000000114415
ZMAT4 / zinc finger matrin-type 4 / Q8BZ94* / Q9H898*ENSGALG0000000347015


Protein motifs (from Interpro)
Interpro ID Name
 IPR003604  Matrin/U1-C-like, C2H2-type zinc finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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