ENSMUSG00000052676


Mus musculus

Features
Gene ID: ENSMUSG00000052676
  
Biological name :Zmat1
  
Synonyms : zinc finger, matrin type 1 / Zmat1
  
Possible biological names infered from orthology : Q5H9K5
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: E3
Gene start: 134971372
Gene end: 135009209
  
Corresponding Affymetrix probe sets: 10606770 (MoGene1.0st)   1435829_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000066815
Ensembl peptide - ENSMUSP00000108810
NCBI entrez gene - 215693     See in Manteia.
MGI - MGI:2442284
RefSeq - NM_175446
RefSeq Peptide - NP_780655
swissprot - G5E8E4
swissprot - Z4YL92
Ensembl - ENSMUSG00000052676
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zgc:114104ENSDARG00000058679Danio rerio
 ENSGALG00000046009Gallus gallus
 ZMAT1ENSG00000166432Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Krcc1 / Q99JT5 / Lysine-rich coiled-coil protein 1 / Q9NPI7* / lysine rich coiled-coil 1*ENSMUSG0000005301219
Q9R0B7 / Zfp346 / zinc finger protein 346 / Q9UL40* / ZNF346*ENSMUSG000000214814
Zmat4 / Q8BZ94 / zinc finger, matrin type 4 / Q9H898*ENSMUSG000000374924


Protein motifs (from Interpro)
Interpro ID Name
 IPR003604  Matrin/U1-C-like, C2H2-type zinc finger
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr