ENSGALG00000003478


Gallus gallus

Features
Gene ID: ENSGALG00000003478
  
Biological name :GFI1B
  
Synonyms : GFI1B / O42409 / Zinc finger protein Gfi-1b
  
Possible biological names infered from orthology : growth factor independent 1B transcriptional repressor / O70237 / Q5VTD9
  
Species: Gallus gallus
  
Chr. number: 17
Strand: 1
Band:
Gene start: 7228969
Gene end: 7237845
  
Corresponding Affymetrix probe sets: Gga.580.1.S1_at (Chicken Array)   Gga.580.1.S2_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005496
NCBI entrez gene - 395977     See in Manteia.
RefSeq - NM_205091
RefSeq - XM_015279335
RefSeq Peptide - NP_990422
swissprot - O42409
Ensembl - ENSGALG00000003478
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gfi1bENSDARG00000079947Danio rerio
 GFI1BENSG00000165702Homo sapiens
 Gfi1bENSMUSG00000026815Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GFI1 / growth factor independent 1 transcriptional repressor / Q99684*ENSGALG0000004365055
FEZF1 / FEZ family zinc finger 1 / A0PJY2* / Q0VDQ9* / Fez family zinc finger protein 1 *ENSGALG0000000894127
FEZF2 / FEZ family zinc finger 2 / Q8TBJ5* / Q9ESP5* / Fez family zinc finger protein 2 *ENSGALG0000000718423


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type
 IPR029840  Zinc finger protein Gfi-1/1b


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 cellular_componentGO:0016363 nuclear matrix IEA
 molecular_functionGO:0001085 RNA polymerase II transcription factor binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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