ENSGALG00000003886


Gallus gallus

Features
Gene ID: ENSGALG00000003886
  
Biological name :SGCD
  
Synonyms : sarcoglycan delta / SGCD
  
Possible biological names infered from orthology : P82347 / Q92629 / sarcoglycan, delta (dystrophin-associated glycoprotein)
  
Species: Gallus gallus
  
Chr. number: 13
Strand: -1
Band:
Gene start: 11524677
Gene end: 11645193
  
Corresponding Affymetrix probe sets: Gga.12901.1.S1_at (Chicken Array)   Gga.12901.2.S1_at (Chicken Array)   Gga.12901.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000006172
NCBI entrez gene - 416251     See in Manteia.
RefSeq - XM_015293901
RefSeq - XM_015293902
RefSeq - XM_015293903
RefSeq - XM_015293904
RefSeq - XM_015293905
RefSeq - XM_015293906
RefSeq - XM_015293900
swissprot - E1C6L7
Ensembl - ENSGALG00000003886
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sgcdENSDARG00000098573Danio rerio
 SGCDENSG00000170624Homo sapiens
 SgcdENSMUSG00000020354Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SGCZ / sarcoglycan zeta / Q8BX51* / Q96LD1* / Zeta-sarcoglycan *ENSGALG0000001368462
SGCG / sarcoglycan gamma / P82348* / Q13326* / sarcoglycan, gamma (dystrophin-associated glycoprotein)*ENSGALG0000001712251


Protein motifs (from Interpro)
Interpro ID Name
 IPR006875  Sarcoglycan complex subunit protein
 IPR027661  Delta-sarcoglycan


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007517 muscle organ development IBA
 biological_processGO:0048738 cardiac muscle tissue development IBA
 biological_processGO:0055001 muscle cell development IBA
 biological_processGO:0060047 heart contraction IBA
 biological_processGO:0061024 membrane organization IBA
 cellular_componentGO:0016010 dystrophin-associated glycoprotein complex IEA
 cellular_componentGO:0016011 dystroglycan complex IEA
 cellular_componentGO:0016012 sarcoglycan complex IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0042383 sarcolemma IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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