ENSGALG00000004171


Gallus gallus
proteinRNF111smadprocessubiquitinationregulationzincfingerligaseubiquitin-dependentcatabolictranscriptionring-typeringfyvephd-typeeubiquitin-proteinarkadian-terminalpolyubiquitinationpatternspecificationtransforminggrowthfactorbetareceptorsignalingpathwayproteasome-mediated

Features
Gene ID: ENSGALG00000004171
  
Biological name :RNF111
  
Synonyms : ring finger protein 111 / RNF111
  
Possible biological names infered from orthology : Mus musculus ring finger 111 (Rnf111), transcript variant 2, mRNA. / Q6ZNA4 / Q99ML9
  
Species: Gallus gallus
  
Chr. number: 10
Strand: -1
Band:
Gene start: 6760760
Gene end: 6811000
  
Corresponding Affymetrix probe sets: Gga.19754.1.S1_at (Chicken Array)   Gga.2488.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046802
Ensembl peptide - ENSGALP00000057408
Ensembl peptide - ENSGALP00000006621
NCBI entrez gene - 374021     See in Manteia.
RefSeq - XM_015278754
RefSeq - XM_015278749
RefSeq - XM_015278751
RefSeq - XM_015278752
RefSeq - XM_015278753
RefSeq - NM_001199751
RefSeq - XM_015278745
RefSeq - XM_015278746
RefSeq - XM_015278747
RefSeq - XM_015278748
RefSeq Peptide - NP_001186680
swissprot - A0A1D5PWS1
swissprot - F1P2A5
swissprot - A0A1D5P2A7
Ensembl - ENSGALG00000004171
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rnf111ENSDARG00000078802Danio rerio
 Q6ZNA4ENSG00000157450Homo sapiens
 Q99ML9ENSMUSG00000032217Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RNF165 / ring finger protein 165 / E9QAU8* / Q6ZSG1*ENSGALG0000003101813


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR029306  E3 ubiquitin-protein ligase Arkadia, N-terminal


Gene Ontology (GO)
nitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcell communicationresponse to endogenous stimulusresponse to chemicalcellular response to stimuluscatabolic processbiosynthetic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcell communicationresponse to endogenous stimulusresponse to chemicalcellular response to stimuluscatabolic processbiosynthetic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcell communicationresponse to endogenous stimulusresponse to chemicalcellular response to stimuluscatabolic processbiosynthetic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcell communicationresponse to endogenous stimulusresponse to chemicalcellular response to stimuluscatabolic processbiosynthetic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcell communicationresponse to endogenous stimulusresponse to chemicalcellular response to stimuluscatabolic processbiosynthetic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcell communicationresponse to endogenous stimulusresponse to chemicalcellular response to stimuluscatabolic processbiosynthetic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcell communicationresponse to endogenous stimulusresponse to chemicalcellular response to stimuluscatabolic processbiosynthetic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcell communicationresponse to endogenous stimulusresponse to chemicalcellular response to stimuluscatabolic processbiosynthetic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcell communicationresponse to endogenous stimulusresponse to chemicalcellular response to stimuluscatabolic processbiosynthetic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcell communicationresponse to endogenous stimulusresponse to chemicalcellular response to stimuluscatabolic processbiosynthetic processnitrogen comnitrogen compound metabolic processcellular metcellular metabolic processprimary metaprimary metabolic processorganic subsorganic substance metabolic processanatomical sanatomical structure developmentcell communicell communicationresponse to response to endogenous stimulusresponse to response to chemicalcellular rescellular response to stimuluscatabolic prcatabolic processbiosyntheticbiosynthetic process
protein bindingcatalytic activity, acting on a proteintransferase activityprotein bindingcatalytic activity, acting on a proteintransferase activityprotein bindingcatalytic activity, acting on a proteintransferase activityprotein bindingcatalytic activity, acting on a proteintransferase activityprotein bindingcatalytic activity, acting on a proteintransferase activityprotein bindingcatalytic activity, acting on a proteintransferase activityprotein bindingcatalytic activity, acting on a proteintransferase activityprotein bindingcatalytic activity, acting on a proteintransferase activityprotein bindingcatalytic activity, acting on a proteintransferase activityprotein bindingcatalytic activity, acting on a proteintransferase activityprotein bindingprotein bindingcatalytic activity, acting on a proteincatalytic activity, acting on a proteintransferase activitytransferase activity
cellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellcellorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IEA
 biological_processGO:0007389 pattern specification process IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0030511 positive regulation of transforming growth factor beta receptor signaling pathway IEA
 biological_processGO:0030579 ubiquitin-dependent SMAD protein catabolic process IEA
 biological_processGO:0031398 positive regulation of protein ubiquitination IEA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IBA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0032184 SUMO polymer binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription
Formation of Incision Complex in GG-NER
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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