ENSGALG00000004276


Gallus gallus

Features
Gene ID: ENSGALG00000004276
  
Biological name :CHST12
  
Synonyms : carbohydrate sulfotransferase 12 / CHST12
  
Possible biological names infered from orthology : Q99LL3 / Q9NRB3
  
Species: Gallus gallus
  
Chr. number: 14
Strand: 1
Band:
Gene start: 3145182
Gene end: 3146474
  
Corresponding Affymetrix probe sets: GgaAffx.2642.1.A1_at (Chicken Array)   GgaAffx.2642.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000006789
NCBI entrez gene - 416469     See in Manteia.
RefSeq - XM_015294348
RefSeq - XM_015294351
RefSeq - XM_015294349
RefSeq - XM_015294350
swissprot - E1BR90
Ensembl - ENSGALG00000004276
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chst12aENSDARG00000028786Danio rerio
 CHST12ENSG00000136213Homo sapiens
 Chst12ENSMUSG00000036599Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CHST11 / carbohydrate sulfotransferase 11 / Q9JME2* / Q9NPF2*ENSGALG0000003060731
CHST13 / carbohydrate sulfotransferase 13 / Q8NET6* / carbohydrate (chondroitin 4) sulfotransferase 13*ENSGALG0000002963230
CHST9 / carbohydrate sulfotransferase 9 / Q76EC5* / Q7L1S5*ENSGALG0000001948927
CHST8 / carbohydrate sulfotransferase 8 / Q8BQ86* / Q9H2A9*ENSGALG0000000490325
CHST10 / carbohydrate sulfotransferase 10 precursor / O43529* / carbohydrate sulfotransferase 10*ENSGALG0000001676924
ENSGALG0000000859917
CHST14* / Q80V53* / Q8NCH0* / carbohydrate sulfotransferase 14*ENSGALG000000265318


Protein motifs (from Interpro)
Interpro ID Name
 IPR005331  Sulfotransferase
 IPR018011  Carbohydrate sulfotransferase 8-10


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0016051 carbohydrate biosynthetic process IEA
 biological_processGO:0030206 chondroitin sulfate biosynthetic process IEA
 biological_processGO:0030208 dermatan sulfate biosynthetic process IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008146 sulfotransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0047756 chondroitin 4-sulfotransferase activity IEA


Pathways (from Reactome)
Pathway description
Chondroitin sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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