ENSGALG00000005004


Gallus gallus

Features
Gene ID: ENSGALG00000005004
  
Biological name :SAMD8
  
Synonyms : SAMD8 / sterile alpha motif domain containing 8
  
Possible biological names infered from orthology : Q96LT4 / Q9DA37
  
Species: Gallus gallus
  
Chr. number: 6
Strand: -1
Band:
Gene start: 14873462
Gene end: 14879562
  
Corresponding Affymetrix probe sets: GgaAffx.3114.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044367
Ensembl peptide - ENSGALP00000007999
NCBI entrez gene - 428946     See in Manteia.
RefSeq - XM_426501
RefSeq - XM_015288296
swissprot - F1NI82
swissprot - A0A1D5NVJ2
Ensembl - ENSGALG00000005004
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SAMD8ENSDARG00000074663Danio rerio
 SAMD8ENSG00000156671Homo sapiens
 Samd8ENSMUSG00000021770Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SGMS1 / sphingomyelin synthase 1 / Q8VCQ6* / Phosphatidylcholine:ceramide cholinephosphotransferase 1 *ENSGALG0000000370134
SGMS2 / sphingomyelin synthase 2 / Q8NHU3* / Q9D4B1* / Phosphatidylcholine:ceramide cholinephosphotransferase 2 *ENSGALG0000001053530


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR025749  Sphingomyelin synthase-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0046513 ceramide biosynthetic process IEA
 biological_processGO:1905373 ceramide phosphoethanolamine biosynthetic process IEA
 biological_processGO:2000303 regulation of ceramide biosynthetic process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030173 integral component of Golgi membrane IBA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IEA
 molecular_functionGO:0002950 ceramide phosphoethanolamine synthase activity IEA
 molecular_functionGO:0033188 sphingomyelin synthase activity IBA
 molecular_functionGO:0047493 ceramide cholinephosphotransferase activity IBA


Pathways (from Reactome)
Pathway description
Sphingolipid de novo biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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