ENSGALG00000010535


Gallus gallus

Features
Gene ID: ENSGALG00000010535
  
Biological name :SGMS2
  
Synonyms : SGMS2 / sphingomyelin synthase 2
  
Possible biological names infered from orthology : Phosphatidylcholine:ceramide cholinephosphotransferase 2 / Q8NHU3 / Q9D4B1
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 38259658
Gene end: 38285166
  
Corresponding Affymetrix probe sets: Gga.10227.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000017129
NCBI entrez gene - 422529     See in Manteia.
RefSeq - NM_001277826
RefSeq - XM_015276206
RefSeq - XM_015276207
RefSeq Peptide - NP_001264755
swissprot - F1NLG9
Ensembl - ENSGALG00000010535
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SGMS2ENSG00000164023Homo sapiens
 Sgms2ENSMUSG00000050931Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SGMS1 / sphingomyelin synthase 1 / Q8VCQ6* / Phosphatidylcholine:ceramide cholinephosphotransferase 1 *ENSGALG0000000370158
SAMD8 / sterile alpha motif domain containing 8 / Q96LT4* / Q9DA37*ENSGALG0000000500436


Protein motifs (from Interpro)
Interpro ID Name
 IPR025749  Sphingomyelin synthase-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006686 sphingomyelin biosynthetic process IEA
 biological_processGO:0046513 ceramide biosynthetic process IEA
 biological_processGO:1905373 ceramide phosphoethanolamine biosynthetic process IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030173 integral component of Golgi membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IBA
 molecular_functionGO:0002950 ceramide phosphoethanolamine synthase activity IEA
 molecular_functionGO:0033188 sphingomyelin synthase activity IEA
 molecular_functionGO:0047493 ceramide cholinephosphotransferase activity IEA


Pathways (from Reactome)
Pathway description
Sphingolipid de novo biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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