ENSGALG00000005215


Gallus gallus

Features
Gene ID: ENSGALG00000005215
  
Biological name :CACNA1H
  
Synonyms : CACNA1H / calcium voltage-gated channel subunit alpha1 H
  
Possible biological names infered from orthology : O95180 / voltage-dependent T-type calcium channel subunit alpha-1H isoform 2
  
Species: Gallus gallus
  
Chr. number: 14
Strand: -1
Band:
Gene start: 5264613
Gene end: 5339317
  
Corresponding Affymetrix probe sets: GgaAffx.3262.3.S1_at (Chicken Array)   GgaAffx.3262.5.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008367
NCBI entrez gene - 416526     See in Manteia.
RefSeq - XM_015294422
RefSeq - XM_015294423
RefSeq - XM_015294424
swissprot - F1P435
Ensembl - ENSGALG00000005215
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cacna1haENSDARG00000060496Danio rerio
 cacna1hbENSDARG00000099708Danio rerio
 O95180ENSG00000196557Homo sapiens
 Cacna1hENSMUSG00000024112Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CACNA1G / calcium voltage-gated channel subunit alpha1 G / O43497* / calcium channel, voltage-dependent, T type, alpha 1G subunit*ENSGALG0000000762353
CACNA1I / calcium voltage-gated channel subunit alpha1 I / Q9P0X4* / calcium channel, voltage-dependent, alpha 1I subunit*ENSGALG0000003505151
SCN1A / sodium voltage-gated channel alpha subunit 1 / A2APX8* / P35498* / Sodium channel protein type 1 subunit alpha *ENSGALG0000001094321
SCN2A / sodium voltage-gated channel alpha subunit 2 / Q99250* / sodium channel, voltage-gated, type II, alpha*ENSGALG0000001100921
SCN5A / Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. / Q9JJV9* / Q14524* / Sodium channel protein type 5 subunit alpha * / sodium voltage-gated channel alpha subunit 5*ENSGALG0000000611220
SCN3A / sodium voltage-gated channel alpha subunit 3 / Q9NY46* / sodium channel, voltage-gated, type III, alpha*ENSGALG0000001104020
SCN9A / sodium channel protein type 9 subunit alpha / SCN7A* / Q62205* / Q15858* / Q01118* / sodium voltage-gated channel alpha subunit 7* / sodium voltage-gated channel alpha subunit 9*ENSGALG0000002779320
SCN8A / sodium voltage-gated channel alpha subunit 8 / Q9UQD0* / sodium channel, voltage-gated, type VIII, alpha*ENSGALG0000004372820
ENSGALG0000000607219
SCN11A / Gallus gallus sodium voltage-gated channel alpha subunit 11 (SCN11A), mRNA. / Q9UI33* / Q9R053* / Sodium channel protein type 11 subunit alpha * / sodium voltage-gated channel alph...ENSGALG0000002770218
SCN4A / Gallus gallus sodium voltage-gated channel alpha subunit 4 (SCN4A), mRNA. / P35499* / sodium voltage-gated channel alpha subunit 4* / sodium channel, voltage-gated, type IV, alpha*ENSGALG0000003442718


Protein motifs (from Interpro)
Interpro ID Name
 IPR005445  Voltage-dependent calcium channel, T-type, alpha-1 subunit
 IPR005821  Ion transport domain
 IPR027359  Voltage-dependent channel domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0019228 neuronal action potential IBA
 biological_processGO:0032342 aldosterone biosynthetic process IEA
 biological_processGO:0032870 cellular response to hormone stimulus IEA
 biological_processGO:0034651 cortisol biosynthetic process IEA
 biological_processGO:0035725 sodium ion transmembrane transport IEA
 biological_processGO:0035865 cellular response to potassium ion IEA
 biological_processGO:0042391 regulation of membrane potential IEA
 biological_processGO:0045956 positive regulation of calcium ion-dependent exocytosis IBA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0070509 calcium ion import IEA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 biological_processGO:0086010 membrane depolarization during action potential IBA
 biological_processGO:0098662 inorganic cation transmembrane transport IEA
 biological_processGO:2000344 positive regulation of acrosome reaction IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0005891 voltage-gated calcium channel complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005245 voltage-gated calcium channel activity IEA
 molecular_functionGO:0005248 voltage-gated sodium channel activity IBA
 molecular_functionGO:0008332 low voltage-gated calcium channel activity IEA
 molecular_functionGO:0097110 scaffold protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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