ENSGALG00000005363


Gallus gallus

Features
Gene ID: ENSGALG00000005363
  
Biological name :CHDH
  
Synonyms : CHDH / choline dehydrogenase
  
Possible biological names infered from orthology : Choline dehydrogenase, mitochondrial / Q8BJ64 / Q8NE62
  
Species: Gallus gallus
  
Chr. number: 12
Strand: -1
Band:
Gene start: 7220510
Gene end: 7234050
  
Corresponding Affymetrix probe sets: Gga.10498.1.S1_at (Chicken Array)   Gga.10498.1.S1_s_at (Chicken Array)   GgaAffx.26483.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008595
NCBI entrez gene - 415993     See in Manteia.
RefSeq - XM_004944570
RefSeq - XM_414335
swissprot - E1C003
Ensembl - ENSGALG00000005363
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chdhENSDARG00000100304Danio rerio
 CHDHENSG00000016391Homo sapiens
 ChdhENSMUSG00000015970Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000172  Glucose-methanol-choline oxidoreductase, N-terminal
 IPR007867  Glucose-methanol-choline oxidoreductase, C-terminal
 IPR011533  Oxygen-dependent choline dehydrogenase
 IPR023753  FAD/NAD(P)-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0019285 glycine betaine biosynthetic process from choline IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005743 mitochondrial inner membrane IEA
 molecular_functionGO:0008812 choline dehydrogenase activity IEA
 molecular_functionGO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA
 molecular_functionGO:0050660 flavin adenine dinucleotide binding IEA


Pathways (from Reactome)
Pathway description
Choline catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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